Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1111 |
Symbol | |
ID | 6332669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1155863 |
End bp | 1156669 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642657395 |
Product | ABC-3 protein |
Protein accession | YP_001931280 |
Protein GI | 188997029 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTTTTT TAGATATTTT CACAGTTCCA TTTATGCTTA ATGCGTTTAT TGGTGGTCTA CTGGTAAGTG TTTTACTTTC TGTTTTGTCA TTTTTTATCT ATGTTAAAAA ATGGTCGTTT ATAAATGTTG GTATTTCTCA TGCTGCATTT GGTGGGCTTG CAATTGGCTT TTTTGCCGGA ATCAATCCAA CATTAACAGG TAGTATTTTT GCTGTTTTGG TGGGTGTGTT GATAGGATAC ATTAGCAAAA AAGGAAAAAT TCATGAAGAT TTGACAATAG GAATTTTGCT TTCTTTTTCA ATGGCTTTTG GTGTAGTTTT AATCTCCTTT TCTAATAATT ATAATTCTGA TTTATTTGCA TTTTTGTTTG GAAATATCTT AACAATCACA AAAGAAGATT TAATTTACAT TTCTATCTTT ACAGTTTTTA CCATTGGATT TTTACTTAAA TACTTTGACG AAATTCTTTA CTGCTGTTTT GATGAAGACC TTGCTTATAT TGGCGCAGTT AATACAAACT TTTTATACTA CAGCGTGATA ACGTTGATAG CAATAGCAAC TGTTTTATCT ATAAAGCTTG TAGGGTCTAT TTTATCAGCT GCGATGATAA TCTTGCCAGC TGCTGTCTCT TCTCAACTTA CATGGCATTA TAAAAAGATT ATTACTCTTT CTATTATATT TAGTCTAATA ATTGTAAGTG CCGGAATAAT TCTTTCATTT TATTTTAACC TTCCATCCGG CTCAACGATA GTTATACTTT ATTCTATCGT GTTTTTTGTG ATAGTGATAG GGAAAAGGCT ATTTTAA
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Protein sequence | MSFLDIFTVP FMLNAFIGGL LVSVLLSVLS FFIYVKKWSF INVGISHAAF GGLAIGFFAG INPTLTGSIF AVLVGVLIGY ISKKGKIHED LTIGILLSFS MAFGVVLISF SNNYNSDLFA FLFGNILTIT KEDLIYISIF TVFTIGFLLK YFDEILYCCF DEDLAYIGAV NTNFLYYSVI TLIAIATVLS IKLVGSILSA AMIILPAAVS SQLTWHYKKI ITLSIIFSLI IVSAGIILSF YFNLPSGSTI VILYSIVFFV IVIGKRLF
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