| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1085 |
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| Symbol | |
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| ID | 6332094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1127098 |
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| End bp | 1127751 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657371 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001931256 |
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| Protein GI | 188997005 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.863324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGATA AAAATTATCT TAAAGTTTTA AAAGAGCTTG GTTTTGAAGA AATTATTTTA
GATAAACCCA TCTTAAATCA AAAATCAAGT AATCAAATAG ATAAAATAGA AGAGTTAAAC
AAGATTTATG AAGAGATTAA AGTTTGCACA AAATGTGATT TACATAAAAG TAGAACAAAT
CCTGTTTTGG GTGAAGGCAA TATTAATGCT AAAATTATGT TCATCGGAGA AGCTCCCGGA
GAGGAAGAAG ATAAGCAAGG AAGACCTTTT GTTGGAAGAG CAGGAAAACT ACTTACAAAA
TGCATAGAAA ATGCAGGGCA TATAAGAGAA GAGGTTTATA TTGCTAACAT CAATAAATGT
AGACCACCTA ACAATAGAAC ACCAACCATA GAAGAGCAGG AAGCTTGCAT TCCTTTTTTA
TTAAGACAGA TAGAAATAAT CAATCCAAAA GTTTTATGCT TACTTGGAGC TACTGCATAC
AGAGGAATTT TTAAGAAGGA AGCAAAAATT ACAAAAGAAA GGGGAAGTAT ATTAGAGTTT
ATGGGCAAAA AGGTTTATAT AACATACCAT CCGGCTTATG TTCTTAGAAA TCCAAAGGAA
GAAGAAACTT TCTGTCAAGA TATAAAAAAT GTTTTTAAAT TAGCGGGAGA ATAA
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| Protein sequence | MIDKNYLKVL KELGFEEIIL DKPILNQKSS NQIDKIEELN KIYEEIKVCT KCDLHKSRTN
PVLGEGNINA KIMFIGEAPG EEEDKQGRPF VGRAGKLLTK CIENAGHIRE EVYIANINKC
RPPNNRTPTI EEQEACIPFL LRQIEIINPK VLCLLGATAY RGIFKKEAKI TKERGSILEF
MGKKVYITYH PAYVLRNPKE EETFCQDIKN VFKLAGE
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