Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1064 |
Symbol | |
ID | 6332699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1104944 |
End bp | 1105855 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642657352 |
Product | homoserine kinase |
Protein accession | YP_001931237 |
Protein GI | 188996986 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGA AAATTGTCAA AGTAAGAGTT CCGGCTACGA CGGCAAACTT AGGTGCAGGC TTTGATACAT TCGGTCTTGC TTTAACACTT TACAATGAGT TTGAAGTAGA AGAAGCAGAT GATGTATTTA TAGAATCTTA TCCAGAAAAT GAATTTTTGA AAAATCCTGA GAATAACCTT TTTATAAAAG TAGTAAAGTA TTTATGTGAA GCAGAAGGAA AGACATTTCA CGGTGCAAAG TTAAAACAGA CTGTCAATAT ACCAGTAGCA AGAGGACTTG GTAGTAGTGC AACAGCAATA GTTGCAGGCA TCTTAACAGG TTTTGCAGTC CATAAAAAAC CGCTGACAGA TGAAGAATTT TTTAAAGTAG CATATCTATT TGAACCACAT CCAGACAACC TTTTACCAGC TTGGAAAGGT GGCTTTATCA CAGCATTAAA AACAGAAGAT AAAACATATT ACAGTAAAAT AGATTTTCCA CAAGAGTTAA AAGCAGTTGT TGTAATACCT GATTTTGAGC TATCAACAGA GCTTGCAAGG TCAGTACTAC CAAAAGAAAT ACCATTAAAA GATGCAGTAT TTAATATTCA AAGAGCATCA TTATTTATAA GAGCATTGCA AGAAAAAAGA TTTGATTTAT TAAAAGTAGC AATGGAAGAT AGATTGCATC AACCATACAG AAAAAGCCTA ATTCCAAACT TTGATAAGGT TATACAGTAT GCTTACGACT CAGGAGCAGT TGGTGCATCC TTAAGCGGTG CAGGTAGTAC AATGTTAGCT CTTGCCTTGG ATAATTTTGA CAAAATTGGT CAGGCAATGG TATCAGCCTT TTCAGAAGCG GGCATAAATG CGAAATATCT TGTTTTGGAC GTAGATACGG AAGGTGCAAA GGTTGAGATA GTGGAGAAGT AG
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Protein sequence | MTKKIVKVRV PATTANLGAG FDTFGLALTL YNEFEVEEAD DVFIESYPEN EFLKNPENNL FIKVVKYLCE AEGKTFHGAK LKQTVNIPVA RGLGSSATAI VAGILTGFAV HKKPLTDEEF FKVAYLFEPH PDNLLPAWKG GFITALKTED KTYYSKIDFP QELKAVVVIP DFELSTELAR SVLPKEIPLK DAVFNIQRAS LFIRALQEKR FDLLKVAMED RLHQPYRKSL IPNFDKVIQY AYDSGAVGAS LSGAGSTMLA LALDNFDKIG QAMVSAFSEA GINAKYLVLD VDTEGAKVEI VEK
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