| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1057 |
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| Symbol | |
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| ID | 6330982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1099621 |
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| End bp | 1101345 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657345 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001931230 |
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| Protein GI | 188996979 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAG GAATTTCAGG CTATCAGTGG ATAGATTTAT CAAAAACAAA CCCAGCACCG
GACTTTTTAG TAAAAAAGTA TGGAGAAATA TTTGCACAGG TTTTATACAA TAGGAGAGAT
CTATTTGATA AAGATTTTTC TCAAGATTAC ATCTTTCCAG AATTAAAAAA TCTTGTAAAT
CCTTCTTACT TTCACAGCCT TGAAGAGGCA GCTATAAAAC TTGCAGAGCA TATCAAAAGA
AAAACCCCAA TCGTTGTATA TGGAGATTAT GATGCAGACG GTATTACAAG CACATCATTA
CTTATAAACT TTTTCAAAGA TTTGGGCGTA AATGCAAAAT ACTATATTCC AAGCAGATTT
TCTGAAGGCT ATGGACTAAA TAAAGAAGCT ATTAAAAAGC TGTCCGAGCA TGGTAAGGTA
TTAATCGTAT GTGATAGTGG AACCAATGCT TTTGATGAAC TCTTTTATGC AAAAAGCTTA
GGGCTTGAAG TGTTTGTTTT AGACCATCAC GAACCTTCCT ATCTTTGGCA AAACTACACA
CCACCATTTT TAAGTGAAAA AATAAATATC ATAAATCCAA AATTTTATTC AGATGAACAA
ATAAATCCAC TTTTTAAACA TTTAGCAACG GTAGGAATAG CATTTTACTT AATAGCGATT
ACAAGAAGAC TTTTAAATAT TGATATAAAG CTTAGAGATT ATTTAGATAT TGTGGCAATT
GGAACTGTAG CAGACGTTGT TCCTATGTCT TTTATAAATA GAGTTATGGT AAAAATCGGT
CTTGAAGAGT TAAACAAGCA AAAAAGAGCT GGAATTAAAG AGCTTTTAAA CGTTGCACGA
GTAAAAAAAG AGTTAACATC TCAGGATATA GGCTTTATAA TTGGACCAAG GATTAATGCA
TCGGGAAGAT TGGCAGATGC GAGAAATTCT GTAAAGCTTT TAGTCACAAG AGACCAATCA
AGAGCAAATG TATTGGCAAT AGAGCTTGAA AATCTAAATA AAAAAAGACA AAAACTTACA
GACAATGTAA TATCTGAAGC AGAAAAAGAA CTGCTGAAGC AAGATTTAAA AAATGTGATA
GTAATAGGAA AGGAAGGTTG GCATAGTGGA GTAGTTGGAA TAGCGGCAGG AAGATTAACA
GAAAAGTATA AATTACCTTC TGTGATTTTA TCTGTAAACA ACGGAAAAGC AGTAGGTTCA
GCAAGAAGCG TTTCAAAAGT AAATATATAT AAAGCCTTGG ATAAATGTAG AGATTTATTT
GATAAATTTG GTGGACATTC AATGGCAGCA GGAATGTCTT TAAAAACAAA TTTGATACCA
GAATTAAAAG AAAGATTAAA CCAAGCAGTT GAAGAGGTTG CAGAAGAAAA ACCATGGGCA
GTTAAAGAGA TAGACATGGA AGTTGAACTA TCCTATTGGA CTACTGAAAA AGTTAAAGAA
ATTTATAACT TACAACCATT TGGAGAGAAA AACCCCATAC CGAAATTCTT AGCAAGAAAT
TTAAAGATTG AGTTCTTTAC AAATCCGGCT AAGAATTTGC TAATTCTAAA CTTAAAAGAT
GAAAATAAAA ATATCTATAA TGCCAAAAGT TGGAAAGCTA AGGAATTATT GGATAAATTA
AGCGTTGGTA TGATAATAGA TATCGTCTAT ACTCCAGAGA TTAATTATTA TAAAGGTTTT
GAAAATTTAG ATTTTGTGGT AGATGATTTA AAGATTGTTA AGTAA
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| Protein sequence | MEIGISGYQW IDLSKTNPAP DFLVKKYGEI FAQVLYNRRD LFDKDFSQDY IFPELKNLVN
PSYFHSLEEA AIKLAEHIKR KTPIVVYGDY DADGITSTSL LINFFKDLGV NAKYYIPSRF
SEGYGLNKEA IKKLSEHGKV LIVCDSGTNA FDELFYAKSL GLEVFVLDHH EPSYLWQNYT
PPFLSEKINI INPKFYSDEQ INPLFKHLAT VGIAFYLIAI TRRLLNIDIK LRDYLDIVAI
GTVADVVPMS FINRVMVKIG LEELNKQKRA GIKELLNVAR VKKELTSQDI GFIIGPRINA
SGRLADARNS VKLLVTRDQS RANVLAIELE NLNKKRQKLT DNVISEAEKE LLKQDLKNVI
VIGKEGWHSG VVGIAAGRLT EKYKLPSVIL SVNNGKAVGS ARSVSKVNIY KALDKCRDLF
DKFGGHSMAA GMSLKTNLIP ELKERLNQAV EEVAEEKPWA VKEIDMEVEL SYWTTEKVKE
IYNLQPFGEK NPIPKFLARN LKIEFFTNPA KNLLILNLKD ENKNIYNAKS WKAKELLDKL
SVGMIIDIVY TPEINYYKGF ENLDFVVDDL KIVK
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