| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1001 |
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| Symbol | |
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| ID | 6332207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1036133 |
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| End bp | 1038619 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657289 |
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| Product | Nucleotidyl transferase |
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| Protein accession | YP_001931174 |
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| Protein GI | 188996923 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAG TTGTTATGGC AGGTGGATTT GGTACAAGAA TACAACCATT AACAAACAGC
ATTCCAAAAC CGATGCTTCC AATCCTTAAC AAACCAATGA TGGAGCATAT TATCAAAAAA
CTCAAATCTG TTGGCATCAC TGAAATCGTT GTCTTATTAT ACTTTAAGCC AGAAGTTATC
CAGAACTACT TTAAAGATGG CTCTGACTTT GGAATTAAAA TAAACTATGT GCTGCCGGAT
GATGATTACG GAACAGCTGG GGCTGTAAAA AAAGCCCAAA AGTATCTTGA TGAAAGGTTT
ATCGTAGTAA GTGGGGATTT AGTTACAGAT TTTGATTTTA AAGAAATAAT CGGATTTCAT
GATGCTGTTA ACTCTAAATT AACAATCACT TTAACATCTG TTGAAGACCC GCTGCAGTTT
GGAGTAGTAA TTACAGATAA AGATGGAAAA ATTCTTAGAT TTTTAGAAAA GCCAGGATGG
GGAGAGGTTT TTAGCGACAC GATAAACACC GGTATTTATG TAATTGAACC AGAGATATTA
GATTATATTC CGGATAATAT TCCGTTTGAT TTTAGTAAAG ACCTATTTCC TAAGCTTATG
AAAGAAGGAA TCACACTTTA CGGATATAAT GCGAAAGGCT ATTGGAGAGA TGTTGGAAAT
CCGGAGAGTT ATAGAGAAGT AAATAAAGAT ATTTTAAAAG AAAAGGTAAA GATAGATTTT
GAAGGCGAAA AACTCGTTTA TCCATCCGGT GTTTTATATA CAAAAACAAA AGATTTACCG
GCAAGTTTAG AAATCGTTGG TAAAGTTGTA TTAGATGAAA ATGTAAAATT AGAAGAAAAT
ATCATACTTG AAAATGTAGT CGTTGGCAAA AACTGTCATA TAGGAAAAAA TACATACATT
AAAGACAGTG TTTTATGGTG GGATGTTAAA ATTGGCAGTA ACTGCAAATT TTTAAACTCT
GTTATCTGTA ATAATAACAT TATAGAAAAC AATGTAAGAG CCGAGCATGG AGTCATCATA
GCAGAAGGTT GTGAGATAAA AGATAATGTA GCATTTGAGA AAGATGTTAT TATTTGGCCA
AACAAACTCA TTGAAGAAGG CGCTATTATT AGTAGCAATC TTATTTGGGG TGATAAATGG
AAATCTTCAT TGTTTGAAGG TGGTAAAGTC TCCGGAAGAA CCAATATTGA GCTTTCTAAT
GAAATGGCAG CCAAGCTTGC TGCAAGCTTT GGGTCTATAT TACCACTTGG AAAGACAATT
TTAATGTCAA GAGATTATCA TAGGGCTTCA AGAATGTTAA AAAGGTCTTT CCTTGGTGGA
CTGCTTGGTT CAGGTTTAAA CGTTATAGAT TTAAAACTTA TGCCACTTCC AGTTATGAGA
TTTTTACTAT CAAATACCGA TGCGATCGGT GGAGTACATT TCAGACAATC TCCAGAAAAT
CCAACAATCA CAGAGATTTT ATTCTACGAC AACGACGGGC TTTTGATAGA CACAAATACA
GAAAAATTCA TAGAAAGAAT ATTCTTTAGA GAAAGTTTTA GAAGAGTAAA TTATAATGAA
ATAGGAGAAA TCAAAGATGA ACCACTGCCA TTAAAATCCT ACAAAGAAAA ATTTTTATCA
TTGATAGACC AAGAGAGCAT TAAAAGTCAT AAATTTAAAA TCATTACAGA CCTGCTAAAT
GGTTCTACTT CCATTATATA TCCAGATATA GTAAATACAA TCGGAATAGA AAACATTATT
CTAAATGCTT ATTTTGATGA GAAAAAATTG TCTCAAATCT CAACTCTTCA TAAAAAATCC
GCTGAAGAAA TCTCGAAAAT GGTCAATGTA TTATCTGCTG ATATAGGATT TGTAATGTAT
CCAAACGGTC AAAGAGTAGT AATCATATCA GATAATGGTG AAATTTTAGA CAATGAAACA
GCTATTTTGA TAATACTCTA TTTGATAGAT AAAACAGTCA ATAGACAAGT TAAAGTTTAC
TTACCTGTCT ACGTTCCTGA AGTTATGGAT GAGATGTTTG AAAATATAAT CGTAGAAAGG
GGTAAAACTA TCGGTCTAAA ATCTAACTTT TTAAAAGATT ATTACTTCTT TGGAAATCTT
GAAGGAAATT ATACATTTAC AGAAATGTCT TATAGCTTTG ATGGTATGTT TGCATCTATT
AAAATTCTTG AGATGTTAAG CAAGACAAAA CAAAAAATAT CAGATATACA GAAAATTATT
CCAAACCATT ATTTTGAGCA TAAAGTTGTA TCTTGTCCTA TTAATCTAAA AGGAAAGATG
ATGAGAAAAT TCACAGAAGA AGCGATAGGA AAAGATGCAT CTTTTGTTGA TGGTGTTAAA
ATCTTTATAG ATAAGAAAAC TTGGATATTA ATGCTTCCAG ACCAGTATGC AGATAGTTTA
CATCTATATG TCAATTCTGA CAAAGAAGAG AAAGCAAAAG CTGTTTTAAA TGAGTATATC
GACAAGATAA ACAAATGGAT GGAATAG
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| Protein sequence | MKAVVMAGGF GTRIQPLTNS IPKPMLPILN KPMMEHIIKK LKSVGITEIV VLLYFKPEVI
QNYFKDGSDF GIKINYVLPD DDYGTAGAVK KAQKYLDERF IVVSGDLVTD FDFKEIIGFH
DAVNSKLTIT LTSVEDPLQF GVVITDKDGK ILRFLEKPGW GEVFSDTINT GIYVIEPEIL
DYIPDNIPFD FSKDLFPKLM KEGITLYGYN AKGYWRDVGN PESYREVNKD ILKEKVKIDF
EGEKLVYPSG VLYTKTKDLP ASLEIVGKVV LDENVKLEEN IILENVVVGK NCHIGKNTYI
KDSVLWWDVK IGSNCKFLNS VICNNNIIEN NVRAEHGVII AEGCEIKDNV AFEKDVIIWP
NKLIEEGAII SSNLIWGDKW KSSLFEGGKV SGRTNIELSN EMAAKLAASF GSILPLGKTI
LMSRDYHRAS RMLKRSFLGG LLGSGLNVID LKLMPLPVMR FLLSNTDAIG GVHFRQSPEN
PTITEILFYD NDGLLIDTNT EKFIERIFFR ESFRRVNYNE IGEIKDEPLP LKSYKEKFLS
LIDQESIKSH KFKIITDLLN GSTSIIYPDI VNTIGIENII LNAYFDEKKL SQISTLHKKS
AEEISKMVNV LSADIGFVMY PNGQRVVIIS DNGEILDNET AILIILYLID KTVNRQVKVY
LPVYVPEVMD EMFENIIVER GKTIGLKSNF LKDYYFFGNL EGNYTFTEMS YSFDGMFASI
KILEMLSKTK QKISDIQKII PNHYFEHKVV SCPINLKGKM MRKFTEEAIG KDASFVDGVK
IFIDKKTWIL MLPDQYADSL HLYVNSDKEE KAKAVLNEYI DKINKWME
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