Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0980 |
Symbol | prfA |
ID | 6332775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1012797 |
End bp | 1013879 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642657269 |
Product | peptide chain release factor 1 |
Protein accession | YP_001931155 |
Protein GI | 188996904 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000572262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA AGTTTTTAGT CCAATTAGAA AGCATAGAAG AAAAAGTAAA AAAGCTTGAA GAGTTGATGG CTGATCCGGA AGTTTTAAAG GATCAGTCTA AAATTCAGTC TATAGCAAAA GAACACAAAG AACTATCAGA AATTTTAAAT CTTTATAATG AATATAAAAA AGTAAGTAGA CAAATAGAAG AAGTAAAACA ACTTCTAAAC TCTACTCCTG ATGATGATTT ACGCGAATTG GCAGAAGAAG AGTTAGAATC TTTAAAAAAA CAGCAGGAAG ATTTAGAGAA AAAAATAGAG ATAGCACTTC TACCAAAAGA CCCTAACGAT GAAAAAAACG TTATCTTAGA AATAAGACAA GGGGCAGGTG GAGACGAAGC ATCTTTATTT GCTGCTGAGC TTTTTAGAAT GTATCAAAGA TACGCTGAAA GACACGGCTG GAAAACAGAA ATTTTAAGCT TACATCCAAC AGAAAAAGGC GGTATAAAAG AAGTTATAGC CTTAATTAAA GGTAAAGGTG CATACTCAAG ATTAAAGTAT GAAAGCGGTG TTCATAGGGT TCAAAGGGTG CCAGAAACTG AATCTTCTGG TAGAATTCAT ACTTCGACTG TTACAGTGGC TGTTTTGCCA GAAGCTGAAG AGGTTGATAT AGAAATAAAA CCAGAAGAGT TGAAGATAGA GACTATGAGA GCTGGCGGAG CTGGTGGTCA ACATGTAAAC ACTACCGATT CAGCTGTTAG AATTACACAC ATTCCCACAG GAATGGTAGT TACATGCCAA GATGAAAGGT CTCAGCTTCA AAATAAAATG AAGGCTATGC AGATTTTAAG AGCAAGACTT AAAGATTATT ATGAAAGGCT TGAAAAAGAA AAGATTGCAA AGGAAAGAAA AGAACAGGTT GGAACCGGTG AAAGAAGTGA AAAGATAAGA ACTTACAACT TTCCACAAAA CAGAGTTACT GACCATAGAG TAAACTATAC TTCTTATAGA ATCAACGATA TTATGGATGG GGATTTAGAC GAAATTATAG ATGTGTTGAT CGCAAAAGAA AACGAAGAAA AATTAGCAAA TTTAGAAATT TAA
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Protein sequence | MDKKFLVQLE SIEEKVKKLE ELMADPEVLK DQSKIQSIAK EHKELSEILN LYNEYKKVSR QIEEVKQLLN STPDDDLREL AEEELESLKK QQEDLEKKIE IALLPKDPND EKNVILEIRQ GAGGDEASLF AAELFRMYQR YAERHGWKTE ILSLHPTEKG GIKEVIALIK GKGAYSRLKY ESGVHRVQRV PETESSGRIH TSTVTVAVLP EAEEVDIEIK PEELKIETMR AGGAGGQHVN TTDSAVRITH IPTGMVVTCQ DERSQLQNKM KAMQILRARL KDYYERLEKE KIAKERKEQV GTGERSEKIR TYNFPQNRVT DHRVNYTSYR INDIMDGDLD EIIDVLIAKE NEEKLANLEI
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