Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0955 |
Symbol | panB |
ID | 6332056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 989085 |
End bp | 989873 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642657246 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001931132 |
Protein GI | 188996881 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000239679 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA TAAATGAGTT TTTTAAAGCC AAGGAAGAAA ATAAGAAAAT AACTGTTATT TCAACTTACG ACTATTGGTC TGCCAAATTA TGCGAAGAGG CTGGAATAGA TGCTATTCTT GTTGGAGACT CTTTATCTAT GGTAGTTCAA GGGAATGATT CCACCTTACC TGTTAGCTTA GATGAGATGA TTTATCATAC AAAAGCCGTA AGAAGAGGAG CACCTAATAC GTTTATTATA GTTGATATGC CGTTTTTAAC CTATCATACA ACCGTCGAAG AAGCTGTTAA AAATGCAGGA AGGGTATTAA AAGAAACAGG AGCTAACGCA GTCAAACTTG AAGGTGGAGA GCAGATAGCA AAAGCCGTAG AAAGGTTAAC ATCTCTTGGA ATTCCTGTAA TGGGACATCT TGGACTTACT CCACAGTTTG TAAATATCCT TGGCGGTTAT AAAGTTCAAG GAAAAAGTCA AGATAGTAGA GAAAAAATAA AAAAAGATGC TAAAATTCTT CAAGAAGCTG GATGTTTTTC GATAGTTTTA GAAGCTGTAC CCGCAGACCT TGCTAAAGAA ATAACAGAAA GTTTAAAAAT TCCAACCATT GGAATAGGAG CCGGAAAGTT TACAGATGGG CAAGTTTTAG TTTTTCATGA TTTGATAGGA ATCTTTCCAA AAACTCCAAA ATTTGTAAAA AGATATTTAG AAGCTGGAAA TCTGATAAAA CAAGCACTTT CACAGTTTAA AGATGAAGTC TTAAAGGAAG ATTTTCCAAG CAAAGAACAT GAATATTAA
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Protein sequence | MKSINEFFKA KEENKKITVI STYDYWSAKL CEEAGIDAIL VGDSLSMVVQ GNDSTLPVSL DEMIYHTKAV RRGAPNTFII VDMPFLTYHT TVEEAVKNAG RVLKETGANA VKLEGGEQIA KAVERLTSLG IPVMGHLGLT PQFVNILGGY KVQGKSQDSR EKIKKDAKIL QEAGCFSIVL EAVPADLAKE ITESLKIPTI GIGAGKFTDG QVLVFHDLIG IFPKTPKFVK RYLEAGNLIK QALSQFKDEV LKEDFPSKEH EY
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