Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0863 |
Symbol | obgE |
ID | 6331645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 898509 |
End bp | 899549 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642657154 |
Product | GTPase ObgE |
Protein accession | YP_001931045 |
Protein GI | 188996794 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00370869 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTATAG ACAAAGCTAA AATTTATGTA AAAGCAGGTG ATGGTGGTAA TGGCTGTGTT GCATTTTTAA GGGAGAAGTA TGTTCCTTTT GGTGGACCGG CTGGTGGTGA TGGTGGAAAA GGTGGAGATA TAATTTTAAT TGCAGATAGC AGTCTTCAAA CATTGATGGA TTTTAAGTAT AAGAGACACT ATAAAGCAGA AAGAGGTCAG CACGGTCAAG GTGGAAATAA AAAAGGTAAA GACGGAGAAG ACTTAATCTT AAAAGTACCT ATCGGAACTG TTGTAAAAGA TGCAGAGACG GGAGAGATTA TAGCTGATTT AGTAAAGAAA GGTCAATCTG TTGTGGTTGC GAAAGGTGGA AAAGGTGGAA GAGGAAATGC AGCGTTTAAG TCTCCAACAA ACCAAGCACC AATGGTTGCG GAAAAAGGAG AGCTCGGTGA AGAAAGATGG ATAGAACTCG AGCTTAAGCT TTTGGCAGAT GTTGGGATTA TTGGATTTCC TAACGCAGGA AAATCAACTT TAATATCTAT TCTATCCAAA GCAAGACCAA AAATAGCAGA TTATCCATTT ACAACTCTTA CACCCGTTCT TGGAGTTTTA CAGCTTGATG TTAATGACTA TATAGTTTTG GCAGATATTC CAGGACTCAT AGAAGGTGCT TCAGAAGGAC TTGGCTTAGG TCATGAGTTT TTAAGACACA TTGAAAGAAC AAAATTTCTA ATTCATCTAA TAGATGTGTC AGATTTTAGA GAAAGGGACC CTATTGATGC TTTTAACATA ATTAACAAAG AGCTTGAAAA ATATTCTCCT GACTTGATAA AAAAACCTCA AATAGTAGTT GCAAATAAAA TAGATGCTTT ATCTGATAAA AGCTTATTAG ATAATCTTGA AAAGTATTTT TCTGAAAGAG GTTATCCTTT TGTTGCAGTA TCTTTGATTA CAAGAGAAAA TATAGATAAG CTTATTAATT TGATTAGAGA AACAAGAGAT AAAATGAAGA AAGAGGAAGT CAATGAAAGT GTTATTTTGG GGAACGCCTG A
|
Protein sequence | MFIDKAKIYV KAGDGGNGCV AFLREKYVPF GGPAGGDGGK GGDIILIADS SLQTLMDFKY KRHYKAERGQ HGQGGNKKGK DGEDLILKVP IGTVVKDAET GEIIADLVKK GQSVVVAKGG KGGRGNAAFK SPTNQAPMVA EKGELGEERW IELELKLLAD VGIIGFPNAG KSTLISILSK ARPKIADYPF TTLTPVLGVL QLDVNDYIVL ADIPGLIEGA SEGLGLGHEF LRHIERTKFL IHLIDVSDFR ERDPIDAFNI INKELEKYSP DLIKKPQIVV ANKIDALSDK SLLDNLEKYF SERGYPFVAV SLITRENIDK LINLIRETRD KMKKEEVNES VILGNA
|
| |