Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0754 |
Symbol | |
ID | 6331670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 784034 |
End bp | 786424 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642657044 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_001930941 |
Protein GI | 188996690 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 87 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGAAAA AAATTATTTT AGGACTGATA GGCTTTACCT CGATACTTAC ACTTATTCTT GGCTTGTACG TTTTTATCAT CACAAGAGAC CTACCAGATG TAAAAGAGCT TGAAAATTGG AAACCACCGG AAGCATCCGT AATCTACGAT TATAAAGATA GAGTATTTTC AGAGCTTTAC GTTCAAAAAA GATACTATGT CTCTATTGAT AAAATTCCAG ACCATGTAAA AAAAGCATTT ATAGCTGTAG AAGATAAAAC ATTCTACGAA AATCCTGGAA TAGATTTTTT TGGAATACTA AGAGCTTTTA TTAGAAATAT TTTCAGCGGC GGCGTTGTAG AAGGTGGAAG TACAATTTCT CAACAGCTTG CTAAAAACTT ATTCTTAACA CCGGAAAGAA GTATAAACAG AAAAATTAAA GAAATAATCT TGGCGCTTAG ATTAAACAAA GTTTATTCAA AAGAAAAAAT TCTTGAAATG TATCTTAATC AAATTTATTT AGGACAAGGA AGCTATGGAG TAGAAGCGGC AGCCCAAACA TATTTTGGAA AACATGTATG GCAGTTGGGT GTTTGTGATG CTGCTGTATT AGCCGGACTT CCAAAAGCAC CTACAAAATA CAATCCATAC CAAAATTTAG ACCTTGCTGA AAAAAGAAAA AAAGTTGTTC TAACGCGAAT GTTAGAAGAA GGCTATATAG ATGAGCATCA ATATCAAAGA TGCGTTGAAA AACCTATAAA ACTCGCCGGA GTTATAAAGA CAGATACATT TAACGATTAT TTTGTAGAGC TTATTAGACA GTGGGTTGTT GAAAGATACG GCGAAGATGC TATTTCTCAA GGTGGTTTAA AAATTTATAC AACCATAGAT AAAGATTTAC ATTATTATGC ACAAAAAAGA CTTCAAAATT GGCTTGAAGA GATGCAGGCA CGTGTTGGAT TTCCAAAGCT TTTTAAAGAT GAAATTGAAA GTTTAAAACA AAAATACGAA TCTCAAAATG TCAGTCCGGA GACAATAATA GCAAATAGTA TCTATGTAGC TAAAATAAAA TCTGTTTCAA AAAATAAAAT AACTTTCACG ATAGATGAAG TAGAAGGTGA AGCATTTGTT AAAGGTAGCA CCGCAAATTT ACAAGAAGAC GGCTATGTAT ATGTAAAATA TACAGAAGAT AGAAAGTTTA AAGTCTTGCC ATTCTTGGAA GGAGTAGTGT TAAGTATAGA TTCTAAAACA GGAGGCATAA GGGTAATAGT TGGTGGATAT GAATTTAGAA AGTCTCAGTT TAACAGAGCA CTGCAAAGTA AAAGACAGCC AGGCTCTGCT ATAAAGCCGA TTATATACGC AACCGCAATA CAAAACGGAT ATACCCAAAT CTCCATTTTA AAAGATGAAC CTATCTCGTT CTGGGATTAT AGTCAAAATA AAGAATGGGT ACCTAAGAAT TATGATGGAA TATACAGAGG AAATGTAATA TTAAGAACCG CATTAGCTAA AAGTCTAAAC GCTGCAACTG TTTATTTACT ATCTCAGTTA GATTTTGACC CTGTAATTGC TACAGCTTAT AGGTTAGGGA TAAAACAAAA ATTACCAAAA TATTATTCTC TTGCCCTTGG TTCTACAGAA TTAACACCAA TAGAGCTTGC AACTGTTTAT GCAACCTTTG GAAATCAAGG GACAAGATGT GAACCTTACT TTATTAGGAA GGTAGTAGAT AGAAACGGAA ATATACTTTA TCAGCAAGAG CCAAGATGTG AAGATGTATA TCCAAAACCA GAAAACGCTG TTATGGTAGA CTTACTTAGA GCTGTAACAA CTGAAGGAAC AGCAGCAAGA GCAGCATCTT TACCATTCCA AACAGCCGGA AAAACTGGAA CAACAAACGA TTATGCAGAC GCATGGTTTG TAGGATTTGA CCCAGATTTA ACCACCTTAG TCTGGATTGG TTATGATAGA AGAAAGCAGA TAGGAAAAGG TATAGCAGGA GCAGAAGGAG CTTTACCACT TTGGATGGAT GTTATGCTGT ATGCAAATAG AGGTATGTCT TACAAAGAAT TTCCGAAAGT GGAAGGAACT ATATACATAC CAATTGACCC AATTACGTTA AAAGTATCTA ATGAAAATTG TCCTGGAAGA TTCTTCCTTT TTGTCGATGG AACATATCCT CAAGTTGATT GCGATGGAAA CCCTGTTGAT TTAAGTAAAA TTTATCCACC TCCACCACAA GAAGCACCAT TAGAAAATCC TACCGAAACA CAACCTCAGC AAGCACCACA AGAAAATACT CCACTACCAG ATGCTATAAA TCCAGAAACA CCAAAGGATA AAAGCCCATC TCCTTCTGAT AAGAATAAGG TTGATAATGA AGAAATAATA AATATAATAA AGAAAAAATA A
|
Protein sequence | MKKKIILGLI GFTSILTLIL GLYVFIITRD LPDVKELENW KPPEASVIYD YKDRVFSELY VQKRYYVSID KIPDHVKKAF IAVEDKTFYE NPGIDFFGIL RAFIRNIFSG GVVEGGSTIS QQLAKNLFLT PERSINRKIK EIILALRLNK VYSKEKILEM YLNQIYLGQG SYGVEAAAQT YFGKHVWQLG VCDAAVLAGL PKAPTKYNPY QNLDLAEKRK KVVLTRMLEE GYIDEHQYQR CVEKPIKLAG VIKTDTFNDY FVELIRQWVV ERYGEDAISQ GGLKIYTTID KDLHYYAQKR LQNWLEEMQA RVGFPKLFKD EIESLKQKYE SQNVSPETII ANSIYVAKIK SVSKNKITFT IDEVEGEAFV KGSTANLQED GYVYVKYTED RKFKVLPFLE GVVLSIDSKT GGIRVIVGGY EFRKSQFNRA LQSKRQPGSA IKPIIYATAI QNGYTQISIL KDEPISFWDY SQNKEWVPKN YDGIYRGNVI LRTALAKSLN AATVYLLSQL DFDPVIATAY RLGIKQKLPK YYSLALGSTE LTPIELATVY ATFGNQGTRC EPYFIRKVVD RNGNILYQQE PRCEDVYPKP ENAVMVDLLR AVTTEGTAAR AASLPFQTAG KTGTTNDYAD AWFVGFDPDL TTLVWIGYDR RKQIGKGIAG AEGALPLWMD VMLYANRGMS YKEFPKVEGT IYIPIDPITL KVSNENCPGR FFLFVDGTYP QVDCDGNPVD LSKIYPPPPQ EAPLENPTET QPQQAPQENT PLPDAINPET PKDKSPSPSD KNKVDNEEII NIIKKK
|
| |