Gene SYO3AOP1_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0754 
Symbol 
ID6331670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp784034 
End bp786424 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content34% 
IMG OID642657044 
Productpenicillin-binding protein, 1A family 
Protein accessionYP_001930941 
Protein GI188996690 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones87 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAA AAATTATTTT AGGACTGATA GGCTTTACCT CGATACTTAC ACTTATTCTT 
GGCTTGTACG TTTTTATCAT CACAAGAGAC CTACCAGATG TAAAAGAGCT TGAAAATTGG
AAACCACCGG AAGCATCCGT AATCTACGAT TATAAAGATA GAGTATTTTC AGAGCTTTAC
GTTCAAAAAA GATACTATGT CTCTATTGAT AAAATTCCAG ACCATGTAAA AAAAGCATTT
ATAGCTGTAG AAGATAAAAC ATTCTACGAA AATCCTGGAA TAGATTTTTT TGGAATACTA
AGAGCTTTTA TTAGAAATAT TTTCAGCGGC GGCGTTGTAG AAGGTGGAAG TACAATTTCT
CAACAGCTTG CTAAAAACTT ATTCTTAACA CCGGAAAGAA GTATAAACAG AAAAATTAAA
GAAATAATCT TGGCGCTTAG ATTAAACAAA GTTTATTCAA AAGAAAAAAT TCTTGAAATG
TATCTTAATC AAATTTATTT AGGACAAGGA AGCTATGGAG TAGAAGCGGC AGCCCAAACA
TATTTTGGAA AACATGTATG GCAGTTGGGT GTTTGTGATG CTGCTGTATT AGCCGGACTT
CCAAAAGCAC CTACAAAATA CAATCCATAC CAAAATTTAG ACCTTGCTGA AAAAAGAAAA
AAAGTTGTTC TAACGCGAAT GTTAGAAGAA GGCTATATAG ATGAGCATCA ATATCAAAGA
TGCGTTGAAA AACCTATAAA ACTCGCCGGA GTTATAAAGA CAGATACATT TAACGATTAT
TTTGTAGAGC TTATTAGACA GTGGGTTGTT GAAAGATACG GCGAAGATGC TATTTCTCAA
GGTGGTTTAA AAATTTATAC AACCATAGAT AAAGATTTAC ATTATTATGC ACAAAAAAGA
CTTCAAAATT GGCTTGAAGA GATGCAGGCA CGTGTTGGAT TTCCAAAGCT TTTTAAAGAT
GAAATTGAAA GTTTAAAACA AAAATACGAA TCTCAAAATG TCAGTCCGGA GACAATAATA
GCAAATAGTA TCTATGTAGC TAAAATAAAA TCTGTTTCAA AAAATAAAAT AACTTTCACG
ATAGATGAAG TAGAAGGTGA AGCATTTGTT AAAGGTAGCA CCGCAAATTT ACAAGAAGAC
GGCTATGTAT ATGTAAAATA TACAGAAGAT AGAAAGTTTA AAGTCTTGCC ATTCTTGGAA
GGAGTAGTGT TAAGTATAGA TTCTAAAACA GGAGGCATAA GGGTAATAGT TGGTGGATAT
GAATTTAGAA AGTCTCAGTT TAACAGAGCA CTGCAAAGTA AAAGACAGCC AGGCTCTGCT
ATAAAGCCGA TTATATACGC AACCGCAATA CAAAACGGAT ATACCCAAAT CTCCATTTTA
AAAGATGAAC CTATCTCGTT CTGGGATTAT AGTCAAAATA AAGAATGGGT ACCTAAGAAT
TATGATGGAA TATACAGAGG AAATGTAATA TTAAGAACCG CATTAGCTAA AAGTCTAAAC
GCTGCAACTG TTTATTTACT ATCTCAGTTA GATTTTGACC CTGTAATTGC TACAGCTTAT
AGGTTAGGGA TAAAACAAAA ATTACCAAAA TATTATTCTC TTGCCCTTGG TTCTACAGAA
TTAACACCAA TAGAGCTTGC AACTGTTTAT GCAACCTTTG GAAATCAAGG GACAAGATGT
GAACCTTACT TTATTAGGAA GGTAGTAGAT AGAAACGGAA ATATACTTTA TCAGCAAGAG
CCAAGATGTG AAGATGTATA TCCAAAACCA GAAAACGCTG TTATGGTAGA CTTACTTAGA
GCTGTAACAA CTGAAGGAAC AGCAGCAAGA GCAGCATCTT TACCATTCCA AACAGCCGGA
AAAACTGGAA CAACAAACGA TTATGCAGAC GCATGGTTTG TAGGATTTGA CCCAGATTTA
ACCACCTTAG TCTGGATTGG TTATGATAGA AGAAAGCAGA TAGGAAAAGG TATAGCAGGA
GCAGAAGGAG CTTTACCACT TTGGATGGAT GTTATGCTGT ATGCAAATAG AGGTATGTCT
TACAAAGAAT TTCCGAAAGT GGAAGGAACT ATATACATAC CAATTGACCC AATTACGTTA
AAAGTATCTA ATGAAAATTG TCCTGGAAGA TTCTTCCTTT TTGTCGATGG AACATATCCT
CAAGTTGATT GCGATGGAAA CCCTGTTGAT TTAAGTAAAA TTTATCCACC TCCACCACAA
GAAGCACCAT TAGAAAATCC TACCGAAACA CAACCTCAGC AAGCACCACA AGAAAATACT
CCACTACCAG ATGCTATAAA TCCAGAAACA CCAAAGGATA AAAGCCCATC TCCTTCTGAT
AAGAATAAGG TTGATAATGA AGAAATAATA AATATAATAA AGAAAAAATA A
 
Protein sequence
MKKKIILGLI GFTSILTLIL GLYVFIITRD LPDVKELENW KPPEASVIYD YKDRVFSELY 
VQKRYYVSID KIPDHVKKAF IAVEDKTFYE NPGIDFFGIL RAFIRNIFSG GVVEGGSTIS
QQLAKNLFLT PERSINRKIK EIILALRLNK VYSKEKILEM YLNQIYLGQG SYGVEAAAQT
YFGKHVWQLG VCDAAVLAGL PKAPTKYNPY QNLDLAEKRK KVVLTRMLEE GYIDEHQYQR
CVEKPIKLAG VIKTDTFNDY FVELIRQWVV ERYGEDAISQ GGLKIYTTID KDLHYYAQKR
LQNWLEEMQA RVGFPKLFKD EIESLKQKYE SQNVSPETII ANSIYVAKIK SVSKNKITFT
IDEVEGEAFV KGSTANLQED GYVYVKYTED RKFKVLPFLE GVVLSIDSKT GGIRVIVGGY
EFRKSQFNRA LQSKRQPGSA IKPIIYATAI QNGYTQISIL KDEPISFWDY SQNKEWVPKN
YDGIYRGNVI LRTALAKSLN AATVYLLSQL DFDPVIATAY RLGIKQKLPK YYSLALGSTE
LTPIELATVY ATFGNQGTRC EPYFIRKVVD RNGNILYQQE PRCEDVYPKP ENAVMVDLLR
AVTTEGTAAR AASLPFQTAG KTGTTNDYAD AWFVGFDPDL TTLVWIGYDR RKQIGKGIAG
AEGALPLWMD VMLYANRGMS YKEFPKVEGT IYIPIDPITL KVSNENCPGR FFLFVDGTYP
QVDCDGNPVD LSKIYPPPPQ EAPLENPTET QPQQAPQENT PLPDAINPET PKDKSPSPSD
KNKVDNEEII NIIKKK