| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0648 |
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| Symbol | |
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| ID | 6332622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 667358 |
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| End bp | 668434 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642656933 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001930838 |
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| Protein GI | 188996587 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0597503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC ATTTTAAAAT TGCAGTTTTA CCCGGTGATG GAATTGGACC AGAGATTATT
GACTCAGCAT TAAAAGTTCT CGACGTGGTA GCTAAAAAAT ATGGATTAAC TTTTGAGTAC
AAATTTGGGC TTGTTGGTGG TGCTGCTATT GATGAGACAG GAGACCCGCT ACCACCGGAA
ACATTAAAGA TATGTAAAGA AAGCGATGCA ATTTTATTTG GTGCTGTAGG TGGAGAAAAA
TGGGACAACT TACCAACAGA CAAAAGACCG GAGAAAGGAT TGCTAAGAAT CAGAAAAGAG
CTTGAACTTT TTGCAAACAT AAGGCCGGCA AAAGCATACG AACCTTTATT AGATGCTTCA
CCGCTCAAGC CAGAAATTAT TAAAGGGGTT GATTTAGTAG TTTTAAGAGA ATTAACAGGG
GATGTTTACT TTGGAGAGCC AAGAGGAAGA GAAGTTAGAA ATGGTGAAAG AGTTGGCTAT
AATACAATGA TTTATTATGA ACACGAAGTT AAAAGAATTG CTAAGCTTGC TTTTGATCTT
GCAAGAAATA GAAGAAAGAA AGTTACAAGC GTAGATAAAG CAAACGTTTT AGAAGTTAGC
GGATTATGGA GAGAAGTGGT AAACGAAGTT CATGCTGACT ATGCAGATGT AGAACTTGAG
CATATGTATG TAGATAATTG TGCTATGCAG CTTATCAGAA GGCCAAAAGA TTTTGACGTG
ATAGTAACCG GAAACATTTT TGGAGATATT ATTTCTGATG AAGCTGGAGC TTTAACCGGT
AGTCTTGGAA TGCTTCCATC TGCAAGCATT GGAGAAAGAT ATGCATTTTA TGAGCCAATC
CACGGTTCAG CACCGGATAT AGCAGGAAAA GGAATTGCAA ATCCAATAGC AACAATCTTA
TCTGCAGCAA TGATGCTTGA AATAACATGT AAAGTTCCAG AAGCTGCAAG AGACATAGAA
AGGGCAATAG AAAAAGTTCT TGAAGATGGA TACAGAACAG GCGATATCTG GTCTCCTGGT
ACTAAAAGAG TAAACACTGC AGAAATGACA GAAGAAATAA TTAAGAGAAT AGGATAA
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| Protein sequence | MKKHFKIAVL PGDGIGPEII DSALKVLDVV AKKYGLTFEY KFGLVGGAAI DETGDPLPPE
TLKICKESDA ILFGAVGGEK WDNLPTDKRP EKGLLRIRKE LELFANIRPA KAYEPLLDAS
PLKPEIIKGV DLVVLRELTG DVYFGEPRGR EVRNGERVGY NTMIYYEHEV KRIAKLAFDL
ARNRRKKVTS VDKANVLEVS GLWREVVNEV HADYADVELE HMYVDNCAMQ LIRRPKDFDV
IVTGNIFGDI ISDEAGALTG SLGMLPSASI GERYAFYEPI HGSAPDIAGK GIANPIATIL
SAAMMLEITC KVPEAARDIE RAIEKVLEDG YRTGDIWSPG TKRVNTAEMT EEIIKRIG
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