| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0586 |
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| Symbol | groEL |
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| ID | 6331582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 601859 |
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| End bp | 603493 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656873 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001930778 |
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| Protein GI | 188996527 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.82546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAA AAAAATTAGT TTATGGTGAC GAAGCAAGAG CTAAATTAAA AGCAGGTGTC
GATAAACTTG CAAACGCAGT TAAAGTAACA CTTGGACCAA GAGGTAGAGA AGTAATTTTA
GAAAAAAAAT GGGGTTCTCC AGTAGTTACT AAAGACGGTG TATCTGTTGC AAAAGAAATA
GAGCTTACAG ACCCATACGA AAACATGGCA GCTCAGCTTG TAAAAGAAGT TGCATCTAAG
ACAGCAGACG TTGCTGGTGA TGGAACAACA ACAGCCACAG TATTAACTCA GGCAATCTAT
GAAGAAGGAT TAAAAGCAAT TGCTTCTGGT GCTAATCCAA TTTATGTAAA AAGAGGAATT
GATGAAGCAG TTAAAATAAT TGTTGAAGAA CTCAAAAAAA TATCTAAACC AGTTACTGGA
AGAAAAGAGA TTGAACAAGT TGCTACAATC TCTGCAAACA ACGACCCAGA AATTGGTAAA
ATCATTGCGG ATGCAATGGA GAAAGTAGGA AAAGATGGCG TAATCACTGT TGAAGAATCT
AAATCTGCAG AAACTGTATT AGAAGTAACA GAAGGTATGC AATTTGATAG AGGATACTTA
TCTCCATACT TTGTAACAAA TGCAGAAAAA ATGGAAGCTG TTTTAGAAAA TCCATACATC
TTAATCTATG AAAAGAAAGT AGGCAACATA AGGGAACTTT TACCAGTATT AGAAAAAGTT
GTTCAAACAA ACAAACCACT TTTAATAATT GCTGAAGATG TTGAAGGAGA AGCTCTTGCT
ACATTAGTAG TAAACCATAT CAAAGGAGTA TTAAGAGTAT GTGCAGTTAA AGCTCCAGGA
TTTGGCGAAA GAAGAAAAGC AATGCTTCAA GACATTGCTA TCTTAACAGG CGGTACTGCA
ATCACAGAAG ACCTTGGAAT TAAGCTTGAA TCTGTTGATT TAGATATGCT TGGTAAAGCT
GATAAAGTTG TTGTAGATAA AGATAACACT ACAATTATCG GCGGAAAAGG AAATCCAGAA
GATATCAAAG CAAGAATAGA GCAAATCAAA AAACAAATTG AAACAACAAC TTCTGAATAT
GACAAAGAAA AATTACAAGA AAGACTTGCT AAACTTGCCG GCGGTGTAGC TATCATTAAA
GTTGGTGCTG CAACAGAAGC AGAACTAAAA GAGAAAAAAG ACAGAGTTGA TGACGCAGTA
CATGCTACAA AAGCTGCAGT AGAAGAAGGT ATTGTTCCAG GTGGTGGTAT TGCAATATTT
AGAGCATCAA GAGCACTTTG CAACATAAAA GAAGAAAACA CAGACAAAGC TTGGGGTATC
AAGATTGTTA AAAATGCTTG CAAAGTTCCA TTAAAACAAA TTGCTTATAA CGCAGGATTT
GAAGGTTCTG TGATAATTGA AAAAATCAAA GATGTTGACA ATGTAAACTA CGGATTTGAT
GCAGCTACTG GTGAGTATGT AGACATGGTA GAAGCTGGTA TCATTGACCC AACTAAGGTT
GTAAGAACAG CTCTCCAAAA TGCTGCATCT ATTGCAGGAA CAATGCTTAC AGCTGAATGC
TTAGTAGCAG AAATTAAGGA AAAAGAAGAA AAACTCCCAG GCGCAGGCGG TGGAATGGGA
GACATGGACT TCTAA
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| Protein sequence | MAAKKLVYGD EARAKLKAGV DKLANAVKVT LGPRGREVIL EKKWGSPVVT KDGVSVAKEI
ELTDPYENMA AQLVKEVASK TADVAGDGTT TATVLTQAIY EEGLKAIASG ANPIYVKRGI
DEAVKIIVEE LKKISKPVTG RKEIEQVATI SANNDPEIGK IIADAMEKVG KDGVITVEES
KSAETVLEVT EGMQFDRGYL SPYFVTNAEK MEAVLENPYI LIYEKKVGNI RELLPVLEKV
VQTNKPLLII AEDVEGEALA TLVVNHIKGV LRVCAVKAPG FGERRKAMLQ DIAILTGGTA
ITEDLGIKLE SVDLDMLGKA DKVVVDKDNT TIIGGKGNPE DIKARIEQIK KQIETTTSEY
DKEKLQERLA KLAGGVAIIK VGAATEAELK EKKDRVDDAV HATKAAVEEG IVPGGGIAIF
RASRALCNIK EENTDKAWGI KIVKNACKVP LKQIAYNAGF EGSVIIEKIK DVDNVNYGFD
AATGEYVDMV EAGIIDPTKV VRTALQNAAS IAGTMLTAEC LVAEIKEKEE KLPGAGGGMG
DMDF
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