Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0556 |
Symbol | |
ID | 6332380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 572359 |
End bp | 573834 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642656845 |
Product | UbiD family decarboxylase |
Protein accession | YP_001930750 |
Protein GI | 188996499 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 100 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTATG AAGATTTAAG GGAGTTTATA TCAGACCTTG AAAAAAACGG AGAGTTAGTC AGAGTAAAAA GTAAAGTTAG TCCGATTCTT GAAATAACCG AGCTTGCAGA TAGAATGTCA AAGCTTCCAA AAGGTGGAAA GGCTTTACTT TTTGAAAACG TTGAAGGATA CGAAAACATC CCGGTTTTAA TCAATGCCTT TGGAAGTGAA AAGCGTATGA AAATGGCACT GGGCGTTGAA AGTTTTGAAA GCATCGGCTG GAAATTATAT AAAATCTTAA AACCAGAAAT TCCTAATACA TTTTTAGACA AGATAAAAAA GCTACCAGAA TTGAAAAGAT TAAACGACGC TTTACCTGTT GTTGTCAAAG ATGGAAAATG TAAAGAAGTA ATCAAAAAAG GTCAAGATGT AAACATCTTT GATTTTCCGG TTTTAAAATG TTGGCCAAAA GACGGTGGAA GGTTCATAAC ACTTCCGATA GTCATTTCAA AAGACCCGGA AAACGGAATA AGAAATGTAG GAATGTACAG AATACAGCTT ATAGATAGAG ACAAAGTAAC AGTTCATTGG CAGATTCATA AAGGCGGTTC TCATCATTTT TGGAAGGCTA AAAAACTTGG TGTTAAAATC CCTGTTGCTA TAGTGGTAGG TGCAGACCCT GTTCTTACTT ACTGTGCATC CGCTCCACTA CCTGAAGATG TAGACGAATT TTTATTCGCC GGTATTATTA GAGACAAAGG TGTTAAGCTT GTAAAATGTG AAACGGTTGA TTTAGAAGTT CCGGCAGATG CAGAAATTGT GATAGAAGGA TACATAGACC CAAGCGAGCC ATTAGTTGAT GAAGGACCAT TTGGAGACCA TACAGGATTT TACACTCCTG TTGATAAATA TCCATTAATG CATATAATAT GTATAACTCA TAGGAAAAAT CCTATCTATC ATACAACGGT GGTAGGAAAG CCGCCAATGG AAGATGGTTG GCTTGGAAAA GCAACAGAAA GAATATTTTT ACCACTTGTT CAGTTTAATT TACCAGAAAT TGTAGATTAC AATTTGCCAA TCTCTGGATG TTTTCATAAC TTTGCTTTTG TATCTATAAA AAAACGTTAT CCCGGACATG CATTTAAAGT TATTAACGCA CTTTGGGGGC TTGGTCAGTT AATGTTTGAA AAGCATATAA TAGTTTTTGA TGAATGGGTA AATATTCATG ATATTGATGA AGTTTTATGG ATTTGGGGTA ATAATGTAGA CCCTTCAAGA GATGTAATTA TTCAAAAAGG TGTAATAGAT GTTCTTGACC ATTCTACAAA CCTGCCGGGC TTTGGTGGAA AAATGGGAAT AGATGCAACT ACTAAATGGA AAGAAGAAGG CTATACAAGA GATTGGCCAG AGGTTGCAAA AATGGATGAA GAAGTAAAGA AAAAGGTTTT GCCTGTTTGG TACGAGATAC TGCAAAAGAT GAAAGGTGAA AGGTGA
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Protein sequence | MPYEDLREFI SDLEKNGELV RVKSKVSPIL EITELADRMS KLPKGGKALL FENVEGYENI PVLINAFGSE KRMKMALGVE SFESIGWKLY KILKPEIPNT FLDKIKKLPE LKRLNDALPV VVKDGKCKEV IKKGQDVNIF DFPVLKCWPK DGGRFITLPI VISKDPENGI RNVGMYRIQL IDRDKVTVHW QIHKGGSHHF WKAKKLGVKI PVAIVVGADP VLTYCASAPL PEDVDEFLFA GIIRDKGVKL VKCETVDLEV PADAEIVIEG YIDPSEPLVD EGPFGDHTGF YTPVDKYPLM HIICITHRKN PIYHTTVVGK PPMEDGWLGK ATERIFLPLV QFNLPEIVDY NLPISGCFHN FAFVSIKKRY PGHAFKVINA LWGLGQLMFE KHIIVFDEWV NIHDIDEVLW IWGNNVDPSR DVIIQKGVID VLDHSTNLPG FGGKMGIDAT TKWKEEGYTR DWPEVAKMDE EVKKKVLPVW YEILQKMKGE R
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