Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0487 |
Symbol | gatA |
ID | 6332405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 497075 |
End bp | 498532 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642656776 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001930682 |
Protein GI | 188996431 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTAT GGAAAAAATC TTTAAAAGAA CTTTCAGACC TTGTTAAATC AAAAGAAGTT AAACCTTCTG AAATCGTTGA AGCTTTCATA GAAAGAAAAA ACCAAGTAGA ACCAAAAATT AAAGCTTACG TGACAGCTTT AGACGATTTA GCATTAGAAA AAGCAAAGAA AAGAGACCAA GAATTAACAA AGCTTGAAAA CATTCCAGAC CTTTTTGGAC TGCCGATAGC AATAAAAGAT AATATTTCTA CAAAAGATAT AAAAACAACT TGTTCATCAA AAATGCTTGA AAACTTTGTT CCTGTTTATG ATGCAACCGT TATTGAAAGA TTGAAATCTC AAGGTTATGT AATCACAGGA AAAACTAACT TAGACGAATT TGCAATGGGT TCTTCAACTG AAAACTCAGC ATTTTTCCCA ACAAGAAACC CATGGGATTT AGAAAGAGTC CCGGGTGGCT CATCCGGTGG GTCTGCTGCT GTTGTTGCTT CAGGAATGGC TCCTGCATCT CTTGGGTCTG ATACAGGAGG CTCAATCAGA CAGCCTGCGG CATTTTGCGG AGTTGTGGGA CTTAAACCTA CATATGGAAG AGTATCAAGA TACGGACTTG TTGCCTTTGC ATCATCCTTA GACCAGATTG GACCATTTGG AAGAACGGTT GAAGATGTAG CAATGATAAT GAACGTTATC TCCGGAAAAG ACCCAAAAGA TTCTACATCA AGAAGCATCC CGGTTCCAAA CTACTTAGAA AGCTTAAACA AAGATGTGAA AGGTTTAAAA ATAGGACTTC CAAAAGAGTT TTATACAGAA GATTTAAATC CACAAATAAA AGAGATAATC TTAAACGCCG TCAAACAGCT TGAAAAAGAA GGAATGACAG CCCACGAGAT TTCTTTACCA TATACAAAGT ATGCAATAGA AACTTACTAC ATCATAGCTC CGTCAGAAGC ATCGTCCAAC TTGGCAAGGT TTGATGGTGT TAGATACGGA TACAGAGCAA AAGAATATAA AAATCTTGAA GAGATGTATT CTAAAACAAG AGATGAAGGC TTTGGTGCAG AAGTAAAAAG AAGAATCATG ATAGGAACTT ATGCATTATC CTCCGGATAT TACGATGCAT ATTACTTAAA AGCTCAAAAG GTTAGAACTT TAATCTATCA AGACTATATG AATGCTTTTG AAAAAGTTGA TGTAATCATA ACTCCAACAA CGCCGGACGT AGCGTTCAAG ATTGGAGAAA AATCAAACGA CCCAATCCAG ATGTATTTAT CAGATATTTT TACAGTATCA GCCAACATGG CAACTGTTCC AGCATTAAGC ATACCATGCG GATTTAAAGA TAATCTGCCG GTAGGAATGC AGATAATCGG AAAGCCGTTT GATGAAGAGA CCATATTGCA GGTAGCTTAC AAATTTCAAT CTCTAAATGA TTATCATAAG AGATTTCCAG AAGTTTAG
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Protein sequence | MELWKKSLKE LSDLVKSKEV KPSEIVEAFI ERKNQVEPKI KAYVTALDDL ALEKAKKRDQ ELTKLENIPD LFGLPIAIKD NISTKDIKTT CSSKMLENFV PVYDATVIER LKSQGYVITG KTNLDEFAMG SSTENSAFFP TRNPWDLERV PGGSSGGSAA VVASGMAPAS LGSDTGGSIR QPAAFCGVVG LKPTYGRVSR YGLVAFASSL DQIGPFGRTV EDVAMIMNVI SGKDPKDSTS RSIPVPNYLE SLNKDVKGLK IGLPKEFYTE DLNPQIKEII LNAVKQLEKE GMTAHEISLP YTKYAIETYY IIAPSEASSN LARFDGVRYG YRAKEYKNLE EMYSKTRDEG FGAEVKRRIM IGTYALSSGY YDAYYLKAQK VRTLIYQDYM NAFEKVDVII TPTTPDVAFK IGEKSNDPIQ MYLSDIFTVS ANMATVPALS IPCGFKDNLP VGMQIIGKPF DEETILQVAY KFQSLNDYHK RFPEV
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