| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0483 |
|---|
| Symbol | |
|---|
| ID | 6332401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 494971 |
|---|
| End bp | 495765 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642656772 |
|---|
| Product | peptidase A24A domain protein |
|---|
| Protein accession | YP_001930678 |
|---|
| Protein GI | 188996427 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0896921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGT TTGAGCTTAT AAAAATACTG GCTATTTTTA TTTTAGGAGC ATCTATTGGA
AGTTTTCTAA ACGTAGTTAT ATACAGGCTG CCAAGGAATA TGTCTATTGC TTATCCACCA
TCTACATGTC CTGTATGTAA AAATCAGATT AAGTGGTACG ACAACATTCC CATTATTTCT
TATATAATTC TTAAAGGAAA ATGTAGATTT TGTGCCACTA AAATAAGTAT TAGATATCCG
TTAGTAGAAT TCTTTACTGG CATAATGGCT GTTTTTACAT ACTTAAAATT TGGCTTTACG
GTAGATTTTA TATTTATGTT TTATTTTGTT GCTTGTATGA TTGCCTTATC TTTCATAGAT
TTAGAATTTA AAATAATTCC TGATGAGATT AACTTTTCAG GTTTATTTAT GGGTTTTGTT
TATGCCGGTT ATAAGGCTTA TGAAATTAGA GATTTTCATC CGCTTACTGA CGCTTTAATT
GGGGCTGCTG TAGGGGCTGG GTTTTTATAC GCTTTAGCTT TATTTTATCT TAAAGTTAGA
AATATAGAAG CACTTGGATT TGGTGATGTA AAACTTCTTG CATTCATTGG CAGTTATGTT
GGTTGGTTTG GAGCTTTATT TACAATATTT TTTGGGTCTT TACTTGGTCT TCTTGGGTCT
GTTTTCTTTA TGAAGGTGTA CAAAACTGAT GATTTATCAA AATTAGAAAT ACCTTTTGGT
CCATTTCTTG CTATAGCTGG GACTATTTAT TTATTCTTTG GAGAGTGGAT TTATAATTTT
TATTTTGGAG AGTAA
|
|---|
| Protein sequence | MEEFELIKIL AIFILGASIG SFLNVVIYRL PRNMSIAYPP STCPVCKNQI KWYDNIPIIS
YIILKGKCRF CATKISIRYP LVEFFTGIMA VFTYLKFGFT VDFIFMFYFV ACMIALSFID
LEFKIIPDEI NFSGLFMGFV YAGYKAYEIR DFHPLTDALI GAAVGAGFLY ALALFYLKVR
NIEALGFGDV KLLAFIGSYV GWFGALFTIF FGSLLGLLGS VFFMKVYKTD DLSKLEIPFG
PFLAIAGTIY LFFGEWIYNF YFGE
|
|---|
| |