| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0479 |
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| Symbol | |
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| ID | 6331938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 491705 |
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| End bp | 492832 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656768 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001930674 |
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| Protein GI | 188996423 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00195172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAAAAG TTGGAATACT TGGTTCTACC GGTTCTGTTG GAAGTCAGGC ATTAGATGTT
ATCAGAAAGT ATAAAGACCA AATAAAGGTT GAACTTCTTG GAGCTTCTAA GTTATCTGAA
AATCTTATAA ATCAGATTAA AGAGTTTAAA CCATCTTATG TTTATGTTGA AAATGCAGAA
GAAAAAAGTA TAGATGATAT AAAGGTTTTG GTTGGAGAAG ATGGATTAAG GCGGGCTGTT
AATCTTGATT TGGATTTATT TATAAATGCG ATTGCAGGAA TAAAAGGCAT TCTTCCTACT
TATCTACTGC TTAAATACAA TAAAACTCTT GCAACCGCAA ACAAAGAAGC TATTATTTGT
CTTGGAGAGC TACTTAAAGA TAAGTATAAA AAAATTCTTC CAATAGATAG TGAGCATTCT
GCTATTTTTC AGATACTTAA AGATAGTAAT CAAAAAGAAG TTAGAAGAAT TATTCTAACA
GCTTCCGGCG GTCCCTTTGT AAATATGCCG GCTGAAGATT TTGAAAATAT CACAGTTAAA
CAAGCATTAA TCCATCCAAG ATGGAGTATG GGTAAGAAAA TAACCATAGA TAGTGCAACG
CTGATGAATA AAGGGTTAGA AGTTATAGAA GCCCATTATC TGTTTTCAAT GCCCTATGAA
AAAATAGATG TGCTGATCCA TCCAGAAAGT ATCATACACG GAATGGTTGA ATTTGTTGAT
GGAACTGTTA TATCTAACAT GTCTAACCCT GATATGAAAA TTCCTATATC ATATGCTTTA
TTTTATCCGG AAAGAAAGTT TTTATCTGAT AATTACTTAG ATTTTACAAA GATTAAGTCG
CTTAACTTTT TAAAACCAGA CACAGAAAAA TTTCCGTTGT TAAAACTTGC CGTTGAGTGT
GGTAAAAAAG GCGGTGTATA TCCAACAGTT TTGACCGTAG CAGATGAGAT AGCCGTTAAC
TACTTTTTAG AAGAAAGGAT AAAGTTTACA GATATACACA AAATTATCTT AGAGACCTTA
GAAAAGTTTG ATTACAACAA ACTTGATTCC GTAGATGATA TATTTTATAT AATTGATAAA
ACAATAAATT TAGCAACAGA GATAGCAAAG AAGTATGGAA GTACTTGA
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| Protein sequence | MLKVGILGST GSVGSQALDV IRKYKDQIKV ELLGASKLSE NLINQIKEFK PSYVYVENAE
EKSIDDIKVL VGEDGLRRAV NLDLDLFINA IAGIKGILPT YLLLKYNKTL ATANKEAIIC
LGELLKDKYK KILPIDSEHS AIFQILKDSN QKEVRRIILT ASGGPFVNMP AEDFENITVK
QALIHPRWSM GKKITIDSAT LMNKGLEVIE AHYLFSMPYE KIDVLIHPES IIHGMVEFVD
GTVISNMSNP DMKIPISYAL FYPERKFLSD NYLDFTKIKS LNFLKPDTEK FPLLKLAVEC
GKKGGVYPTV LTVADEIAVN YFLEERIKFT DIHKIILETL EKFDYNKLDS VDDIFYIIDK
TINLATEIAK KYGST
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