| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0420 |
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| Symbol | |
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| ID | 6331710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 435592 |
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| End bp | 436491 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656711 |
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| Product | D-alanine/D-alanine ligase |
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| Protein accession | YP_001930617 |
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| Protein GI | 188996366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000379989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTAAAA TCGCACTTTT ATACGGTGGA TATTCAAGAG AAAGAGAGAT TTCTATCAAA
AGTGGAAAAG CGGTAGAAAA AGCTTTAAAC CAACTTGGAT ATGATTATAA GGTATTTGAC
ATAATAGAAA GAGATAAATT TATAAAAGAG ATTTTAGAAT ATAAGCCAGA TTTAGCATTT
ATAGTTTTAC ACGGAAAAGG TGGAGAAGAT GGCACAATTC AAGCTATCTT AGAGTTTCTT
GGCATTCCTT ACACAGGGTC AGATATGAAA ACAAGCGTCA TAGCAATGGA TAAAGTACTA
ACAAAGATGT ATTTGAAAAA CTTTGACATT CCAACGCCAG ATTGGATATT TTTCACAGAA
GAAAAAGAGG CTTTAAATTA TAGACCAGAT TTCCCAGCAG TCGTAAAAGC TCCAACAGAA
GGGTCTTCTA TTGGTGTTTA TATAGTAAAT AATCAACAAG AGTATGAAAA TGCTGTAAAA
GAAGTATTTA ATCTTGATGA TAAAGTATTG ATAGAAAAGT TTATCAAAGG AAGAGAGCTA
ACAGTTAGCA TTCTTGATGA TGAAGTTTTT GATATTGTTG AAGTTGTTGT ATCAGAAGGC
TTCTATGATT TTAATAACAA ATACATTACA GGAAAAACTC AGTATATATG CCCGGCTCAA
TTAGATGAAG ATGTGTATAA AAACGTTCAA GGTTTAGGAC ATAAAGTTTA TAAACTTTTG
AATTGCAAAG GACCTGCAAG AGTTGATATC ATTTTAGAAA ACGATAAGAA TCCATATGTG
TTGGAAGTAA ATACAATCCC CGGAATGACA GAGTTTAGTC TTCTTCCCAA GGCTGCATCG
GCAAGAGGAA TAACGTTTAA CCAACTTGTA GAAAAAATAA TAAAAAATAG TTTAAAATGA
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| Protein sequence | MTKIALLYGG YSREREISIK SGKAVEKALN QLGYDYKVFD IIERDKFIKE ILEYKPDLAF
IVLHGKGGED GTIQAILEFL GIPYTGSDMK TSVIAMDKVL TKMYLKNFDI PTPDWIFFTE
EKEALNYRPD FPAVVKAPTE GSSIGVYIVN NQQEYENAVK EVFNLDDKVL IEKFIKGREL
TVSILDDEVF DIVEVVVSEG FYDFNNKYIT GKTQYICPAQ LDEDVYKNVQ GLGHKVYKLL
NCKGPARVDI ILENDKNPYV LEVNTIPGMT EFSLLPKAAS ARGITFNQLV EKIIKNSLK
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