Gene SYO3AOP1_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0352 
Symbol 
ID6332024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp368316 
End bp369617 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content32% 
IMG OID642656643 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001930551 
Protein GI188996300 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCC TATTTTTAAG AGTGTATGTA TTATCTCTCA TCTTGCTTTT TAGTGCTTTT 
TTGTCAATCT ATCTTTTTAC ACATTTGACG ATAAAAAATT CTGTGCATCA AGAGATAAGT
TCATCTTTAA ACATTCTGTG GCGGTCAGTT GCGTATCTTA TTAAAGAAGA GGGAAAGTTT
CAGTACGATG AAGAAGTCAT GATAAACTTT AGAAAAGGTT CTGGCAACTA TCTAAAAATC
TTGGAAGATA ACAAATATGT TGAATTACAA CCTGATAAAA GCGTTCTTAA TTTCCCATTG
GAAAATGGAC TTTTCTTTTT TGAAATCAAC GGTAAAGAGT GCGCAGGCTA TGGTGAAAAA
TACGGTAGAT ATTATATTTT GGTTTACAGA GAAATCAGCA ATCAGCAAGC AATGTTAAAA
AAGTTTTCTA AAAATTTTTT TACAGGTTGG CTTGCTATTT TGGTAGTATA TACTCTAATT
GCATATCCTT TATGGTATTT ATCTTTTAGA GTTGTTATGA GGTTAGCCAA AAAAATAGAA
GAGAGTAGCC CAGCCAAGCT TGACATCTTA GATGAAAATG TGTTTTCTGA GATAAAACCA
ATTGTAAAAG CCTACAATCA ATTAGTAAAT CAATTAAACA AGTATCTTGA TACTCAAAAG
TTTTTCTTTT ATCACCTGTC CCACGAGCTT AAAACACCGT TGTCTATCAT AAGAACTTCA
ACAGACTTAG CCTTACGAAA ACCAAGAAGT CAAGCTGAGA TGAGAGAGTT TCTGTTAAGC
ATTAAAAGCG CAGTTGAAAG AGCTTCTCAG GTAGTAGAAA AACTTTTATT GCTATACAGA
TTAGAAACTC AAAATGTAGA TCCAAAGAGA GAAATTGTAG AGCTAAAAAC TTTAATACTC
GGCATATTAG GGGATTTTAA ACAACTGATT AATAATAAAA ATCTAAGTTT TGAGATTTTT
GAAGATGAAT TTAAGGTGTT TGGTGATTAT GAGCTTATTC ATTCACTTTT TAGCAACATT
ATAGAAAATG CAATAAAATA TAGCCCGCAA GACGGAAAAA TAGGTATAAA AAAAGATGGC
TATTGCGTTA TCATAGAGGA CGAAGGTATC GGAATTTCAA AAGAAGAGCT GATTAAAATT
TTTGAACCTT TTTACAGGTC AGAAAAAGCA AAGCTTGAAG AAGGTTCGGG TCTTGGTCTT
AGTATAAGCA AAGTTATAGC TAAAATCTTA GGTTGGGAAT TAACCATTCA TAGTGAACTT
GACAGAGGAA CTTCTGTAAA AATTTGTACA AAAAGTCATT AA
 
Protein sequence
MKSLFLRVYV LSLILLFSAF LSIYLFTHLT IKNSVHQEIS SSLNILWRSV AYLIKEEGKF 
QYDEEVMINF RKGSGNYLKI LEDNKYVELQ PDKSVLNFPL ENGLFFFEIN GKECAGYGEK
YGRYYILVYR EISNQQAMLK KFSKNFFTGW LAILVVYTLI AYPLWYLSFR VVMRLAKKIE
ESSPAKLDIL DENVFSEIKP IVKAYNQLVN QLNKYLDTQK FFFYHLSHEL KTPLSIIRTS
TDLALRKPRS QAEMREFLLS IKSAVERASQ VVEKLLLLYR LETQNVDPKR EIVELKTLIL
GILGDFKQLI NNKNLSFEIF EDEFKVFGDY ELIHSLFSNI IENAIKYSPQ DGKIGIKKDG
YCVIIEDEGI GISKEELIKI FEPFYRSEKA KLEEGSGLGL SISKVIAKIL GWELTIHSEL
DRGTSVKICT KSH