Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0342 |
Symbol | |
ID | 6332715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 349784 |
End bp | 351445 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642656628 |
Product | transposase |
Protein accession | YP_001930541 |
Protein GI | 188996290 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000508394 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAACTC TGCAGTGCCA ACTTGAATTT CAAAATAAGC AAGAGAAAGA GATTGTATTA GATTTGATGC GTAGATTTTC ATCAGCAATG AGATATGCTT ATCAAAGGTT ATTGGAAGGT GAAAAAAGAA AGGATTTGAA AAAGAATTTA TCAGAACTAT TTGACATAAA CACAAGATAT TCAGATGATG CTATACTCTT GGCACACTCA ACAATCGCAT CATGCGAAGA AAGAGGTCAA AACCCAAAGA AGCTCATATT TGGCTCAAGG AAATTATTTG AGCAACTAAA GAAAAATCAT TTAACAGGAA AAAGAAGAAA AGAGTTAAAG ACAAGATGGA AAGAAAGCAG ACAGGGAAAT TTGTATTCAA GAGGAGATAA ATCTAAACAA GGAAATCTGA ATTTAAGATT TGAGTGGATT GATAATCAGC TTTACTTGAG AATAAACACA GGAAATAGAC AGTATATCTA TGCAAAAGTA ATTAGAAGTG TTAAGAGAAA AAATGATAAA TGGATAGAGT TTATGTTTAT GCTGGAAAAT GCGTATAGAT ACGAAGCGTG GTTTCCATAC TCAGTCAGAC TAAAAGTAAA AAACGGTAAT GTATATGCTT TTATATCTAT AGAAGAGAAA CTACCACCTA TTACAATCAA AAAAGACAAT GGAATAATAG GTATAGATGT AAACGCATAT CCATTTCATC TTGCATTGGC TTTTATAAGT AAAGACGGAA ATTTAGAGAA ATATGAAAGA ATTAATCTAA ACGAACTGTT AGAAGTAAAT TCAGAAAAAA GACAATACTT AGAATGGCAA ATAGCACATA AGATAATAGA GATTGCCAAG AGAGAAAACA AAGCAATATC TATAGAAAAT CTGCAAAAAC TACCAAAAGG CAAAAGAGGA GACGGATTTG CAAAACTAAG AAGAAGACTA CAAAAATGGA GCTATAAAAG ATTATTAGAA AAAATAGAAG TATTAGCAAG AAGAAGTGGC ATAGAAATAA TAAAAGTCAA TCCAGCATAT ACATCAGTAA TTGGAAAGCT AAAATACTCG CCACAATACA ACATAGATAA AGATATAGCA GGAGCTTACG TAATAGCAAG GAGAGGGTTG GGATTTAAAG AGAAATTACC AAAGAATTAC AAAGAACTTT TAAATGATAC TGATTTTCTA TCATACACTA TAGCAAAAAT TGAAGATAAC ATTAAAAAAC TAAAACAAAA ACTAAAAGAA GAGAAAAACG AATACAAGAG AAATAAACTA AAAAGCACAT TAGCAAAATT AAGAAAAAAC CTAAAAATAC TACAACAACA CGTCTCACTT CTCACATCTC ACGTCTCACG TTTAGAAAGT GGAAAGAGTG AGACAGCTAC CCAACAAACT GTCAACCAAC GGAAGGAACA GGTGAGGGGC TTACTTACAG GTAAGCATAA AAGCTGGCAA GTTCTTTCCA TAGCCTTGGC CTTCTGCTGT CTTGAAAGAT CGTATAGAGA TCTTTCTCCC TTAAAACAAA TAATTGTTTT AGGAGATTGG ATAGCAGTGG CTAACAGGTT AGTTCCTGTA CTTGGTGCAG GGACTATGAC ACTTCCAAAA TACCGCCTGT TGGGGTCGGA AGTGTCTGAA ATGGCGGAAT ACAAATACCC CAACCCAAAC TGTACAAACT GA
|
Protein sequence | MITLQCQLEF QNKQEKEIVL DLMRRFSSAM RYAYQRLLEG EKRKDLKKNL SELFDINTRY SDDAILLAHS TIASCEERGQ NPKKLIFGSR KLFEQLKKNH LTGKRRKELK TRWKESRQGN LYSRGDKSKQ GNLNLRFEWI DNQLYLRINT GNRQYIYAKV IRSVKRKNDK WIEFMFMLEN AYRYEAWFPY SVRLKVKNGN VYAFISIEEK LPPITIKKDN GIIGIDVNAY PFHLALAFIS KDGNLEKYER INLNELLEVN SEKRQYLEWQ IAHKIIEIAK RENKAISIEN LQKLPKGKRG DGFAKLRRRL QKWSYKRLLE KIEVLARRSG IEIIKVNPAY TSVIGKLKYS PQYNIDKDIA GAYVIARRGL GFKEKLPKNY KELLNDTDFL SYTIAKIEDN IKKLKQKLKE EKNEYKRNKL KSTLAKLRKN LKILQQHVSL LTSHVSRLES GKSETATQQT VNQRKEQVRG LLTGKHKSWQ VLSIALAFCC LERSYRDLSP LKQIIVLGDW IAVANRLVPV LGAGTMTLPK YRLLGSEVSE MAEYKYPNPN CTN
|
| |