Gene SYO3AOP1_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0329 
Symbol 
ID6332538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp337789 
End bp338484 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content34% 
IMG OID642656615 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001930528 
Protein GI188996277 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTGA TTTATGTTAT TGAAGATGAT GAAGATATCA ATGAGCTTTT GACTTATAAC 
TTTAAAAAAG AAGGCTTTGA TGTAAGGTCG TTTCCAAACG GTAAAGTTGC TTTTGAACAT
ATCAAGCAAG AAAAACCAGA TATTGTAGTA TTAGATTTAA TGATGCCAGA AGTTGATGGT
CTTGAGTTTT GTAAGCTTGT TAGGTCTGAT AAAGAATTAG AGCATATTCC ATTAATAATG
CTAACAGCAA AAAGCACTGA GATAGATAAA ATTGTTGGTC TTGAACTTGG TGCAGATGAT
TATGTGACAA AACCATTTTC ATTTAGAGAG CTTCTTGCGA GAGTAAAGGC ACTTTTGAGA
CGTTCTAAGT CTCTTCATTT TCCTACTGCA AAACCAGAGT ATAAGTTTGG AGATTTAAAA
ATAAGTCCAG AAAAATTTGA AGTAACGATA AAAGGTCAGC CAGTTCATTT GACAACTACT
CAGTTTAAGC TTCTCTTAGC ACTTGTAAAC TCTCAAGGTA AAGTATTATC AAGAGATTAC
ATAATAGAGC ATGTTTGGGC TTGGGATAAA GATGTTTATG ATAGAACGAT TGATGTTCAT
ATAAAAAAGT TAAGAGAGCT GCTAAAAGAA TATGGAAACT GCATTAAAAC TATAAGAGGA
GTAGGCTATA AGTGGGAATG CGAGCCTACC CCATGA
 
Protein sequence
MALIYVIEDD EDINELLTYN FKKEGFDVRS FPNGKVAFEH IKQEKPDIVV LDLMMPEVDG 
LEFCKLVRSD KELEHIPLIM LTAKSTEIDK IVGLELGADD YVTKPFSFRE LLARVKALLR
RSKSLHFPTA KPEYKFGDLK ISPEKFEVTI KGQPVHLTTT QFKLLLALVN SQGKVLSRDY
IIEHVWAWDK DVYDRTIDVH IKKLRELLKE YGNCIKTIRG VGYKWECEPT P