Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0322 |
Symbol | |
ID | 6331523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 329967 |
End bp | 330572 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642656607 |
Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
Protein accession | YP_001930521 |
Protein GI | 188996270 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA TTTTAAATCA ATTAATACCA ATAGTTATAG AACAAACACC AAGAGGTGAA AGAGCATACG ATATATATTC AAGACTATTA AAAGATAGAA TAATTCTTCT TGGAACACCT ATTGATGACC ATATTGCTAA CTTAGTTGTT GCACAGCTTT TATTTTTAGA ATCTGAAGAT CCGGATAAAG ATATTTATAT GTACATTAAC TCTCCCGGTG GTGTAGTTAC TGCCGGTCTT GCTATTTACG ATACTATGAA CTACATAAAA CCAGACGTAG TTACAATCTG CATGGGGCAA GCAGCATCTA TGGGAGCTTT CTTACTCTCT GCCGGAGCCA AGGGAAAGAG ATACTCTCTA CCAAATGCAA GAATAATGAT TCACCAACCA CTTGGTGGAT TCCAAGGACA GGCTACGGAT ATAGAAATCC ATGCAAGAGA AATTCTAAGA CTTAAAAGAA TGTTAAACGA ATACTTAGCA AAGCACACAG GACAGCCAAT TGAAAAAATA GAAGCAGACA CAGAAAGAGA TTACTTTATG TCTGCTGAAG AGGCTAAGGA ATATGGTCTT ATAGATAAAG TTATTTATAA AAGAGGTGAA AAATAA
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Protein sequence | MDKILNQLIP IVIEQTPRGE RAYDIYSRLL KDRIILLGTP IDDHIANLVV AQLLFLESED PDKDIYMYIN SPGGVVTAGL AIYDTMNYIK PDVVTICMGQ AASMGAFLLS AGAKGKRYSL PNARIMIHQP LGGFQGQATD IEIHAREILR LKRMLNEYLA KHTGQPIEKI EADTERDYFM SAEEAKEYGL IDKVIYKRGE K
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