Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0291 |
Symbol | rplC |
ID | 6331063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 294955 |
End bp | 295635 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642656571 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001930490 |
Protein GI | 188996239 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0279726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAG GCATAATTGG AAAAAAAATA GGAATGACGA AAGTTTTTGT TAATGGAAAG GCAATTCCTG TAACAGTTAT ACAAGCTGGA CCTTGCTATG TGGCTTATAC AAGAACCCAG GAAAAGGATG GGTATAATGC AGTTGCTCTT ACCTTTGGAG AAAGAAAAGA AAAAAATATT CCAAAGCCAT TACTTGCAAT TTTCAAAAAA GCTAACATAA AACCTGCAAA AGTTATTAAG GAATTTCCTT TAAAAGATGG AGAAACCGTA GAGCCTGGAC AAGAAATTAG GATCGAAAAT GTTTTTGAAA AAGGTGATTT AGTAGATATC ACAGGCAAAT CAAAAGGTAG AGGTTTTACC TCTGTAATGA AAAGATGGGA CTTTGCAGGA TTTCCTAAAT CTCATGGTCA TAGATATCAC AGAGCTGTAG GTTCTATCGG TTGTAGAACA GAGCCAGGTA GAGTTTGGAA GACAAAGAGA ATGGCGGGTC ATTACGGTAA TGAAACAGTA ACAGTACTTG GCCTTGAAGT TGTTGATATA ATTCCAGAAA AAAATGTAAT ATTAGTAAAA GGGTCTGTAC CTGGTGCTCC AAACTCAACA GTATTCTTAA AACAAAGTGT AATAGCTGAT AGAAGAAAAG GAAAATTAAA ATTAGCAAAA TCAAAAGCAA TGTATGCTTA A
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Protein sequence | MPKGIIGKKI GMTKVFVNGK AIPVTVIQAG PCYVAYTRTQ EKDGYNAVAL TFGERKEKNI PKPLLAIFKK ANIKPAKVIK EFPLKDGETV EPGQEIRIEN VFEKGDLVDI TGKSKGRGFT SVMKRWDFAG FPKSHGHRYH RAVGSIGCRT EPGRVWKTKR MAGHYGNETV TVLGLEVVDI IPEKNVILVK GSVPGAPNST VFLKQSVIAD RRKGKLKLAK SKAMYA
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