| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0213 |
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| Symbol | |
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| ID | 6331742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 229400 |
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| End bp | 231226 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656491 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001930412 |
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| Protein GI | 188996161 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTAG AAGAGAAAAG AGTACCAAAA GCAGTTAGGG AAGATATTAG GAATATTGCT
ATTATTGCCC ACGTAGACCA TGGAAAAACA ACGCTTGTTG ACGCACTACT TAAACAAAGT
GGTACTTTTA GAGAAAATGA AGAAGTAGCG GAAAGAGTTA TGGATAATAT CGACTTAGAA
AGAGAGCGTG GTATCACAAT TATGGCAAAA AATACAGCTA TAAGATATAA AAACTATAAA
ATTAACATCG TTGATACTCC GGGGCACGCT GATTTTGGCG GAGAGGTAGA AAGAACATTA
AAAATGGTTG ATGGTGTAAT ACTTCTTGTT GATGCATCAG AAGGACCACT TCCTCAGACA
AGATTTGTTT TAAGAAAAGC GTTAGAATCT AATCTAACAC CTATCGTTGT TATAAACAAA
ATAGATAGAC CGGATGCAAG AATTCAAGAA GTGATAAATG AAGTTTACGA TTTATTTATA
GATTTAGACG CAACGGAAGA GCAGCTTGAA TTTCCAATTC TTTACACGAT AGCAAGAGAC
GGAATCGCAA AAGAAAACCT TGAAGATGAT TCAAAAGATT TAAAACCATT GTTTGATAAA
ATCATAGAAT ATATACCGGC ACCATCTTAT GACCCGGACA TGGGATTACA ATTTCTGATT
ACATCCTTAG ATTATGACAA CTTCGTCGGG AGGTTAGCAA TTGGAAGAAT TTTTAATGGT
TCTGTAAAAG TAAATCAACA AGTGTCAGTG GTAAAAAAAG ATGGAACAAT AATTAAAGGA
ACTGTAAGAA CATTATATAC TTACGAAGGA CTCAAAAGAG TAGAAACAAA AGAAGCAAAA
GCAGGAGATA TAGTAGCAAT AGCAGGATTG GAAGATATAA CCATCGGAGA AACTATAGCT
GACGCTGAAA ATCCTGTAGG ACTTCCTCCA ATAACAGTAG AAGAGCCAAC AATATCTATG
ATATTCTCAG TAAACGATTC TCCATTTGCA GGAAGAAGCG GAAAATTTTT AACATCAAGA
CATTTAAGAG ATAGATTGTA CAAAGAGACA TTAACTAACG TTGCTATAAG AGTATCTGAC
ACAGAAAATC CAGACTCATT CTTAGTAATG GGTAGAGGAG AATTACAGCT ATCCATACTG
GCTGAAATGA TGAGAAGGGA AGGCTATGAG TTTCAAGTAT CAAAACCGGA AGTTATAGTA
AAAGAAGAAA ATGGTAAAAA ATTAGAGCCG GTAGAAAGGG TTTTAATAGA TATTCCGGAA
GAGTACGTAG GAACAGTTAC TCAAAAGCTT GGTTCAAGAA AAGGCAGAAT GATAAACATG
ATTAATCATG GATTTGGAAG GGTAAGGCTT GAATTTATTG TTCCATCAAG AGGACTGATT
GGATACAGGT CAGAGTTTAA AACAGATACA AGAGGCGAAG GCTTAATCAA CACAATCTTT
GAAGGCTGGG AAGAGTGGCA GGGAGAGATT AAAACAAGAC AAAACGGAGC ATTGATAGCT
GATAGAAAAG GTGTAGCAAC ACCATACGCA ATTTTTGGAT TACAAGATAG AGGAGTTTTC
TTTATAGAAC CGGGTACAGA AGTTTACGAA GGCATGATTG TAGGAGAACA CAGCAGAGAT
AATGACCTTG ATGTAAACGT AACAAGAGAA AAGAAATTAA CTAACATGAG AGCTTCCGGC
TCTGATGAAA ACATTAAAAT CATCCCGGCT AAAAAGATGG ACTTTGAAAG AGCCATGGAA
TGGATTAATG AAGATGAGCT TATAGAAGTA ACGCCGGATG CTATAAGAAT AAGAAAGAAA
ATTTTAGAAG CAAACAAAAG AAAGTGA
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| Protein sequence | MLLEEKRVPK AVREDIRNIA IIAHVDHGKT TLVDALLKQS GTFRENEEVA ERVMDNIDLE
RERGITIMAK NTAIRYKNYK INIVDTPGHA DFGGEVERTL KMVDGVILLV DASEGPLPQT
RFVLRKALES NLTPIVVINK IDRPDARIQE VINEVYDLFI DLDATEEQLE FPILYTIARD
GIAKENLEDD SKDLKPLFDK IIEYIPAPSY DPDMGLQFLI TSLDYDNFVG RLAIGRIFNG
SVKVNQQVSV VKKDGTIIKG TVRTLYTYEG LKRVETKEAK AGDIVAIAGL EDITIGETIA
DAENPVGLPP ITVEEPTISM IFSVNDSPFA GRSGKFLTSR HLRDRLYKET LTNVAIRVSD
TENPDSFLVM GRGELQLSIL AEMMRREGYE FQVSKPEVIV KEENGKKLEP VERVLIDIPE
EYVGTVTQKL GSRKGRMINM INHGFGRVRL EFIVPSRGLI GYRSEFKTDT RGEGLINTIF
EGWEEWQGEI KTRQNGALIA DRKGVATPYA IFGLQDRGVF FIEPGTEVYE GMIVGEHSRD
NDLDVNVTRE KKLTNMRASG SDENIKIIPA KKMDFERAME WINEDELIEV TPDAIRIRKK
ILEANKRK
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