Gene SYO3AOP1_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0199 
Symbol 
ID6331397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp216705 
End bp218060 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content32% 
IMG OID642656477 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_001930398 
Protein GI188996147 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.940712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATA TTTTGGTTGT AGATGATGAA AAAAATATTC AAAGTTTGAT TAAAGATATT 
CTCAGCGATG AAGGTCATTC TGTAAGCGTT GCCGGAAGTT TGACATCTGC AAAGGATTTA
ATAAAAAAAG AAGTTTTTGA TTTGATATTC TTAGATGTAT GGCTACCTGA TGGAGACGGT
ATATCTTTGA TTTCTTTTAT AAAAGAGCAT CAGCCAAACA GCTTTATAGT TATGATTTCC
GGTCATGCAA ACATACCTAT AGCCGTTCAA GCAATAAAGG AAGGTGCTTT CGACTTTTTA
GAAAAACCGC TATCTACAGA CACGATTTTT GCAGTAATAG AAAAAATAGA AAAAGAAATA
AAATTGAGAC AAAGCCTTCA ATTCTATAAA GAAAAAGAAG AAAGTCAGAT TGAAATCATC
GGAAATAGTG AAAAGATAGT TCAATTGAAA AAACAGATAG AAAAAGTAGC AAAAACAAAT
GCATGGGTAA TGATTCTTGG AGAAAACGGA ACCGGTAAAG AACTTGTAGC AAAATCCATT
CATTATCAAT CTAGCAGAAA AGATTATCCA TTTGTAGATA TAAACTGTGC TGCAATACCT
GACGAGCTTT TTGAAGCAGA ATTTTTTGGA TACGAAAAAG GAGCGTTTAC TAATGCTTTC
ACAAGAAAGA TAGGGAAGTT AGAGCTTGCA GACAAAGGAA CGTTATTTTT AGATGAAGTG
GCAGATATGA GCCTATCTGC CCAAGCCAAG CTTTTAAGAG TTTTAGAAGA AAAAGAATTT
TCAAGACTTG GAAGTAATAC GAAAATAAAG GTTGATTTAA GAGTAATCTC AGCAACAAAC
AAAGATATAC AAAAAGAAGT AGAAAAAGGC ACTTTCAGAC AGGACTTAGC TTTTAGACTA
TCAGTAATTC CATTAACCGT ACCACCACTG AGAGAAAGAG GAGAAGATAT AATCTTACTT
GCAGAGTACT TTATAAAGAA ATTTTCAATA GAAAATAAAG TAGAACCACC AATACTGACT
GATGAAGTAA AAAGAACTTT TTTAAACTAT TCTTGGCCCG GAAATGTAAG AGAGCTAAAA
AATCTAATGG AAAGAATTGT TATTTTTAAC AGTGGTGATT ATGTTTATAA CAAAGACCTA
CCCCCAAACA TGTTTGGTAA AACTACTGCC CATGAAGAAA AAAGCATTCC AATTACAATA
AGACCTTTGA AAGATGCAAA AGAAGAACTT GAAAGAGAGA TGATTAAAAA AGCCTTGGAA
GTATACAATA AAAATTTAAA AGAAGTTGCA AAGGCTCTTG ATATTGATTT ATCGTCTTTG
TATAGAAAAA TAAAACAGCA TCAGTTGGAG GAGTAA
 
Protein sequence
MLNILVVDDE KNIQSLIKDI LSDEGHSVSV AGSLTSAKDL IKKEVFDLIF LDVWLPDGDG 
ISLISFIKEH QPNSFIVMIS GHANIPIAVQ AIKEGAFDFL EKPLSTDTIF AVIEKIEKEI
KLRQSLQFYK EKEESQIEII GNSEKIVQLK KQIEKVAKTN AWVMILGENG TGKELVAKSI
HYQSSRKDYP FVDINCAAIP DELFEAEFFG YEKGAFTNAF TRKIGKLELA DKGTLFLDEV
ADMSLSAQAK LLRVLEEKEF SRLGSNTKIK VDLRVISATN KDIQKEVEKG TFRQDLAFRL
SVIPLTVPPL RERGEDIILL AEYFIKKFSI ENKVEPPILT DEVKRTFLNY SWPGNVRELK
NLMERIVIFN SGDYVYNKDL PPNMFGKTTA HEEKSIPITI RPLKDAKEEL EREMIKKALE
VYNKNLKEVA KALDIDLSSL YRKIKQHQLE E