Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0175 |
Symbol | |
ID | 6331373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 192216 |
End bp | 193172 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656453 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_001930374 |
Protein GI | 188996123 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGAAA TCATCAGTTT TAAAGTAGAA GAAGAGTTTT CAAATAAGAG ATTAGACCAA TTTTTAGCCT TAGTTTATCC TGAGTATTCA AGGTCTTTTT ATCAAAATCT TATAGAAAAC AGATTTGTAT TGTTAGATAA CAATCCTGTT AGAAAATCAT CAACAAAAGT AAAAACCGGG CAAGAGTTTA CAATCATCAT ACCACCACCC GAGCCTTTAG AAATTGAGCC TGAAAATATT CCACTTGAAA TCTACTACGA AGACGAAGAT TTAGCAGTAG TCTATAAACC ACCCGGAATG GTCGTTCATC CATCGGTTGG TCATACATCG GGAACGCTGG TAAATGCTTT ACTTTATCAT TTTAAAAATG TATCACAGTA TCAAGGAAAA GAAAGGGCAG GGATTGTTCA TAGGTTAGAT AAAGATACCG CCGGACTTTT GATTGTAGCA AAATCAGAAT TTGCACATAA AGAACTTCAA AAAATGTTTC AAGATAGAGA AATAGACAAA AAGTATAAAG CTATCGTTTC TGGAATAGTA AAAAAAGACC ATGGCTTAAT AGACTTACCT ATTGGAAGGT CTATTTACAA CAGGCAAAAA ATGGGAACGG TAGCAACAAA CCCTAAGGAT GCACTAACAG AATACTGGGT AGAAAAACGC TTTGAAAAGC ACAATCTAAC ACTTGTTGAT ATAAAACTTC ACACAGGAAG AACACATCAA ATAAGAGTTC ATTTTTCAGC CATCGGACAT CCGTTATTTA ACGATTTTGT TTATGGATTT AAAAAATCGA ACTTATCATC AGACCTTGCA AAAAATTTAT CAGATAAACT TAAATATCAT GCACTTGTAG CATATAAACT AACATTCAGA CATCCAAGAA CAAACCAAAT GCTAAGCATA GAGCTTAAAA GCTTACCAAA AGAAATAGAA GAAATACTGC AGGAGTTAAG TAAGTGA
|
Protein sequence | MEEIISFKVE EEFSNKRLDQ FLALVYPEYS RSFYQNLIEN RFVLLDNNPV RKSSTKVKTG QEFTIIIPPP EPLEIEPENI PLEIYYEDED LAVVYKPPGM VVHPSVGHTS GTLVNALLYH FKNVSQYQGK ERAGIVHRLD KDTAGLLIVA KSEFAHKELQ KMFQDREIDK KYKAIVSGIV KKDHGLIDLP IGRSIYNRQK MGTVATNPKD ALTEYWVEKR FEKHNLTLVD IKLHTGRTHQ IRVHFSAIGH PLFNDFVYGF KKSNLSSDLA KNLSDKLKYH ALVAYKLTFR HPRTNQMLSI ELKSLPKEIE EILQELSK
|
| |