| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0173 |
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| Symbol | |
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| ID | 6331371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 188340 |
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| End bp | 191858 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656451 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001930372 |
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| Protein GI | 188996121 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACTT ATATAGATAG AATCAACGTT TATGGCTTTA AATCTTATGG AGATAGACAT
TTAACCATTC CACTTGGTCC GGGATTTACT GCGATAGTAG GTCCAAATGG AGCGGGAAAA
AGCAACATAG GTGATAGTAT AGTTTTTTGT CTTGGTATTG CGTCAGCCAG GGCAATGAGA
GCTTTAAAGC TTACAGATTT GATATTTTCT TCAAATGATA AATCAGCACC TTATGCAGAA
GTTGAGATAG TTTTTAAAAA TCTTGGAGCA TTTCCTATAA ACTCAGAAGA AGTAAGAATA
TCAAGAAAAG TAGAGCTTAG CGGAAAATCT ACATATAAAA TAAATGGAAA AACAGTAAAA
CAGCAGGAAG TAGAAGACTT ATTAACTCAG GCAGGAATAC CCATCCAAGG CTATAACATC
GTCACGCAAG GAGATATTTA TAAATTTGTA AACATGACTC CCGGAGAGAG AAGAGAGCTT
CTAAGCGAGA TAGCAGGAAT AACCATCTAT GAAGAGAAAA AGCAAAAAGC ATTGGCAGAC
TTAAAAGAAG CGCAAGAGAA GGTAGACAAT GTAAAGGCAG TTTTAAAAGA GATAGAGCAT
ACACTAAAAA AATTACAGCA AGAAAAAGAA AACGCAATTT TAGCAATAAA CATAGAAAGC
CAGATAAAAG AGCTTGAAAA TAGACTGCTT GGGGCAAAAC TTTATCATCT ACTCAGTCAA
AAACAACAAG CCTTAGAGCA TCTTCAAGAC ATAGAAAAAG ACCTGCAACA ATTTTATAAA
TCAAAAGAAG AAAACATAGA AAAACAAAAA CAGATACTAA ATCAAATCAG AGATTTAGAA
AATAAATTAA ATGAAATTCA AAACTCATTT TTACCCATAA AAGAGCAGGA AGGTTCTATC
ACTGCAAGCA TCAGAAGTTT AAACGAGAAA AAAGATACCC TTGAAAAAGA AATACAAAGC
ATAGACTCAA AAATCAAACA GCTAATACAA GAAAAAGAAC TGATAGTCAA AGATATACTG
AAGCTTGAAG AAGAGATAAA AACACTTGAA AAACAGCTAC CGGATATAGA AAAAGAGCTT
TTAGAAGCAG AAAAAGAGCT TGAAGAAAAA AATAAAAAGC TTAAAGAGTA TGAAATATTT
GACTCTTCTG TTAAAAATGA CTTGGGAGAG ATAGAAAGAC AAGAAAAAGA GCTGCTTGAC
AAAATCAAAG AGTTAGAAAA GCAAAAAGTA GAATATCAAC TAAAATACAC AACCACAGTA
GAAAAATCAG AAAACTACAA AAAAGAGATT GAAAACCTAA AACAAGAGAT TGAAAACATA
GAAAAAACCA TAGAAAATAT AAAATCAAAC ACAAAGGACA GTCAAAAAGA AGTTTTAAAC
ATCACAAGTG AAATAAACAG ACTAAAAATC AGAAAAGATG TTTTAGAGAA AAGATTAAAA
GAAAACAGAG AAAAGCTTGA AAAAAACTTC CAAGAGCTTG CAAAAGTCCT TGCACAGCTA
AGCAATATTA GAGAAGATAA AACATCTCTA CTTTTTAAAA ACATAGAAGG TGTTTATGGA
GCTGTTTCAG AAATCATTTC AATAAAAGAC CCAAAAGTCC AAACAGCCAT TGAAGTAGCA
GGTGGTGGAA GGCTTAAAAA CGTTGTAGTT GAAAATGAAG ATGTAGCAAA AAAATGTTTA
GATATTCTAA AACAAGAGAA AGCAGGAAGA GTTACATTTA TTCCTTTAAA CAAAATAAAG
GTTCAAGACA ATCCAAAATT ACCTTTGGCA AAAGGCGTTT TAGGTTATGC GATAGATTTT
GTAAATTATG ACAAAAAAGT TGAAAAAGCC ATAAAGTATG TATTTCAGGA TACTATTATC
ATAGATACAT TTGACACGGC TAAGGTTCTT GGAATTGGAA ATTATAGAAT GGTTACACTT
GATGGCGAAG TCTTTGAAAA ATCAGGAACA ATAACGGGTG GCTCAGAAAA GCAAAGCATC
ACAATCGGAA GGTCATTTTT AGAAGAAGAG AGGAAAAAAC TTGAAGAGAT AGACCAAAAA
TTAAAAGAAG AAGAAAGAGC AATAGAAAAT GAACTAAAGC TAATAAATCA AAAAATCGCA
GAGAATGAAA AAAATCTTGT AAAACTTCAA ACAGAATCTC AAAGTGTAAA CTCAAGAATA
CAAGAATTAG AAAGAGAGCT GACAAACAAA AATTTAAGAA TTGGACATAT AGAAAATGAG
ATTTTCAATC TAAAAAAACA AAGTTTAGAA CTTGAAAGCA AGATTGAAGA GATAAACAAA
AGCATACAAA ACTTAAATCT TATGCTTTCG CAGGTAAAAG ATAAAAAAGA AAAAATGCTA
AGCCGTATGG AAAGCATGGG ATTAAACAAA CTAAGAAAAG AATGGGAGGA AACAACTCAA
AAAGTTTACT CACTAAGAGA CAAAAAGAAA GAGCTTGAGA ACCAGATAGA AAAATTAAAA
TCCAAAGTAG AAAGCCATAA AATAAGAGTG TTCCAGATAG AAAGCGAAAA ATCTGCTTTA
GAAAAAGAGT TTCACGACAA AAAATCAGAG ATAGAAAATA TAAAATCGGA GATAGACAGC
CTTACAAAGC AGTTGTCAGA ACTTTGGAAA GGCTTAAAAG GACAGGAAGA AGAAAGAGAA
AAGCTTATAA ATACTATATC TAATCTAAAA GACCAGCTTA AAAACCTAAG ATACGAAGAA
GACAACATAA ACAGACAGAC AACTTTACTT TTACAAGACA AAGCAAAAGC AGAGCAAAAA
ATAGCAGATT TAGAAGAAGA GATAATACTT CTTAAAGAAG AATACAGCGG CGAGCCAATA
GAAGAAGATG TTAAAGAGAT TGAGAAAAAA TTAAAAGAGC TTCAAGAAAG AAGAAGAAAT
CTTGGATTTG TAAATGAAAA AGCTATTGAG GATTATGAAG AAGAAGAAAA AAGATACAAC
GAAATAAAAG AAAAGTTAGA CACACTAATA AATGAGAAAA AAGCAATAGA AGAGCTTATA
GAAAGCTTAG AAGAAAAGAA AGTTAAGGCG TTTATGGAAG TGTTTGAAAA CATAAACAAA
AATTTAGCCA AGAACTTTAA GATCTTATCT CCATCAGGAA AAGCATACTT AGAGCTTGAA
AACGAGCAAA ATCCATTAAG CGGTGGTGTA TTCTTAAAGG CAAGACCAAG GGGCAAAGAT
GTAAAAAGGC TTGAAATGAT GTCCGGCGGT GAGAAAACAT TAACAGCTTT GTCATTTTTA
TTTGCAGTCC AGCAGTACAG ACCGGCACCA TTTTACTATT TTGATGAAGT AGATGCAGCA
CTTGATGATG CAAACGCAAG AAAAGTAGGT CAGTTAATGA AAGAGTTATC AAAAGAAGAA
CAGTTTATAG TAGTTACCCA TAGAGATGCA ATGGCAAGCT TTGCAGACAG AATAATCGGC
GTATCAGCAA AAGATGGCAT ATCTAACATT TATACATTGG ATATAAATCA AATAAGGGGA
GAACAGTCTC AAGAAGTAAA TGAAGAAGTT TTAACTTAA
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| Protein sequence | METYIDRINV YGFKSYGDRH LTIPLGPGFT AIVGPNGAGK SNIGDSIVFC LGIASARAMR
ALKLTDLIFS SNDKSAPYAE VEIVFKNLGA FPINSEEVRI SRKVELSGKS TYKINGKTVK
QQEVEDLLTQ AGIPIQGYNI VTQGDIYKFV NMTPGERREL LSEIAGITIY EEKKQKALAD
LKEAQEKVDN VKAVLKEIEH TLKKLQQEKE NAILAINIES QIKELENRLL GAKLYHLLSQ
KQQALEHLQD IEKDLQQFYK SKEENIEKQK QILNQIRDLE NKLNEIQNSF LPIKEQEGSI
TASIRSLNEK KDTLEKEIQS IDSKIKQLIQ EKELIVKDIL KLEEEIKTLE KQLPDIEKEL
LEAEKELEEK NKKLKEYEIF DSSVKNDLGE IERQEKELLD KIKELEKQKV EYQLKYTTTV
EKSENYKKEI ENLKQEIENI EKTIENIKSN TKDSQKEVLN ITSEINRLKI RKDVLEKRLK
ENREKLEKNF QELAKVLAQL SNIREDKTSL LFKNIEGVYG AVSEIISIKD PKVQTAIEVA
GGGRLKNVVV ENEDVAKKCL DILKQEKAGR VTFIPLNKIK VQDNPKLPLA KGVLGYAIDF
VNYDKKVEKA IKYVFQDTII IDTFDTAKVL GIGNYRMVTL DGEVFEKSGT ITGGSEKQSI
TIGRSFLEEE RKKLEEIDQK LKEEERAIEN ELKLINQKIA ENEKNLVKLQ TESQSVNSRI
QELERELTNK NLRIGHIENE IFNLKKQSLE LESKIEEINK SIQNLNLMLS QVKDKKEKML
SRMESMGLNK LRKEWEETTQ KVYSLRDKKK ELENQIEKLK SKVESHKIRV FQIESEKSAL
EKEFHDKKSE IENIKSEIDS LTKQLSELWK GLKGQEEERE KLINTISNLK DQLKNLRYEE
DNINRQTTLL LQDKAKAEQK IADLEEEIIL LKEEYSGEPI EEDVKEIEKK LKELQERRRN
LGFVNEKAIE DYEEEEKRYN EIKEKLDTLI NEKKAIEELI ESLEEKKVKA FMEVFENINK
NLAKNFKILS PSGKAYLELE NEQNPLSGGV FLKARPRGKD VKRLEMMSGG EKTLTALSFL
FAVQQYRPAP FYYFDEVDAA LDDANARKVG QLMKELSKEE QFIVVTHRDA MASFADRIIG
VSAKDGISNI YTLDINQIRG EQSQEVNEEV LT
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