Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0161 |
Symbol | |
ID | 6331359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 177848 |
End bp | 178612 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642656439 |
Product | cytochrome c class I |
Protein accession | YP_001930360 |
Protein GI | 188996109 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000207523 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAAA ACACAGCTAT CAGATGGTTG CTCTTCTTCT TCTTCCCAGC CCTGTTTGTC TATGGTTTGT TGCATGTTTA TTCATCTAAA CCTGCTCAAG CTAAAAAGAC AGCAGAACTT ACAGAAATGG AAGAAGCTGG AAGAAAGGTT TACAACAAAT TCTGTGTAGG ATGTCACGGT GAAAACGGTG ATGGAAACAG TATGGCAGCG CCTTTCTTTA AGGACAAGCC ACCAAACTTC CACACCGGCG TATTTAGATG GAAATCTACT CCAGAAGGAA CACTCCCAAC AGATGAAGAC TTGTTACACG TATTAGATTG GGGTATTCCT CAAACACCTA TGCCATCTTT CCATTTGGTA CCAGAAGTTC AAAAAAGAGC AGTTATTGCT TATATCAAAA CTTTCTCTGA CAGATGGAAA AAAGAACAAC CTGGAGAGAG TGTTTATAGC CAAATCAAAA AAGTTCCTGA ATTCTTTGGA ACAAAGGAAT CTATTGAAAA AGGTAAAGAG TTGTATGCTG CAAACTGTAC AGCTTGCCAT GGTGAAAGTG GAAGAGGAGA TGGTCCAATA GCTTCAACTT TACCAGTTCC ACCAACCAAT TTAACTTATC CAGTTAGAGC GGCAGGTCCA TCACCAAAAG ACACGTTTAG AGTTTTAACC GTTGGTCTTG AAGGTTCTCC GATGCCAAAA TTTGACCATT TATCAGAAGA AGACAGATGG CATCTTGTTT CTTACATTGC ATATTTAATG AATCAAGGAA AATAA
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Protein sequence | MGENTAIRWL LFFFFPALFV YGLLHVYSSK PAQAKKTAEL TEMEEAGRKV YNKFCVGCHG ENGDGNSMAA PFFKDKPPNF HTGVFRWKST PEGTLPTDED LLHVLDWGIP QTPMPSFHLV PEVQKRAVIA YIKTFSDRWK KEQPGESVYS QIKKVPEFFG TKESIEKGKE LYAANCTACH GESGRGDGPI ASTLPVPPTN LTYPVRAAGP SPKDTFRVLT VGLEGSPMPK FDHLSEEDRW HLVSYIAYLM NQGK
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