| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0142 |
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| Symbol | |
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| ID | 6331340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 157114 |
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| End bp | 157788 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642656421 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001930342 |
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| Protein GI | 188996091 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00974604 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAATG TAATAATGAT AGAAGATGAC AAAGAATTGG CAGAGCTTTT AACTCAATAT
TTAGCAAAGT TTAATATATC TGTAAAAAAT TTTGAACATT CTAAGAAAGC ACTTGAAGAG
CTTAAGAAAA ATCAAAGTTA TGACCTAATG ATTCTTGATT TAACACTTCC GGAAATTGAT
GGTATAGATA TATGTAAAAT GTTAGCAAAA GAAGGAAATA TTCCCATCAT CATATCCTCG
GCAAGAAGTG ACGATACAGA CAAAATCCTT GCCCTTGAAA TAGGAGCAGA TGATTATTTA
GCTAAGCCGT ATAACCCAAG AGAATTGGTA GCAAGAATTC AAGCTGTTTT AAGAAGAAAA
AATAAAGCAG TTGAAAAAGT AATTAAGTGT GGTGAGTTTG AACTTGATGA AGAAGGTTAT
ATAATTAAGA AAAATGGAGA ACCTTTAAAT CTAACTTCAG CAGAGTATGA GCTTTTATCC
ATGCTTATAA AAAATAAAGG CAGAGTCTTA ACGAGAGATT ATATATTAGA TAATTCAATC
TATTTAAACT ATGACAGTAT AGATAGAACT GTTGATGTTA TAATTGGAAG AATCAGAAAA
AAGATAGGTG ATGACCCAAA AAATCCAAAA TATATCATAT CTGTAAGAGG TTTTGGCTAT
AAATTTGAAT GTTGA
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| Protein sequence | MINVIMIEDD KELAELLTQY LAKFNISVKN FEHSKKALEE LKKNQSYDLM ILDLTLPEID
GIDICKMLAK EGNIPIIISS ARSDDTDKIL ALEIGADDYL AKPYNPRELV ARIQAVLRRK
NKAVEKVIKC GEFELDEEGY IIKKNGEPLN LTSAEYELLS MLIKNKGRVL TRDYILDNSI
YLNYDSIDRT VDVIIGRIRK KIGDDPKNPK YIISVRGFGY KFEC
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