| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0119 |
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| Symbol | |
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| ID | 6331317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 132781 |
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| End bp | 133617 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656398 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_001930319 |
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| Protein GI | 188996068 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000660345 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TAAAAAGAAA TGAAGCTCCT TTATCAGAAA GCGATTGGGA AAAGATTGAT
AAAGTAGTAG TTGAAACAGC AAAAAGAGTT TTAGTAGGAA GAAGATTTAT AGAAATCTCA
GGACCATATG ATCCGTCTGT TCAATTTGTT CCATATGATT ATATAGAAGA TGGAAATTCC
GGAGCTTGTG GTCTTTTTGG TGAAGTAGAT TGTGGTGTTG TAAAAGTTAA AGAAAGAAAA
ATACTTCCTC TGCCAATTAT TTACAAAGAT TTTAAAATTC ATTGGAGAGA TGTAGAATCA
TCTAAAAAGT TTAATATTCC AATTGATTTT AGCGTTGCTG CTGCAGCTGC ATCTCAGGTA
GCTATTGCAG AAGATAGATT AATCTTCCAT GGAGATATTG AAACAGGTTT TCCGGGATTA
TTAAACGTTG AAGGTAAAAA TTCGATATCA ATCTCTGACT GGAATCAAAC AGGAGAAGCT
TTTAAAGATA TACTAAATGC TATCGTTAAA TTAAATGAAA ATGGATTTTA TAATAACTTT
GCTTTGGTTC TAAATCCTCA AGATTATGCA ATGCTAAATA GATTGTATGG AAATAGCGGT
ATTCTTGAAA TAGACCAGAT CAAAAAACTA TTTGATGTTG GAGTATTTAC AACGCCGGTT
ATACCACAAT TTACGGCCGT TGTTGTATCA ACCGGAATTG AAAATTTAGA CCTATTTATA
TCTCAGGACA TGATAACATC ATATTTAAAC TATGATAATA TGGATCATTA TTTCCGTGTT
TTTGAAATTT TAGCACTTAG AATTAAAAGA CCGCAGTGTA TATGTACGAT CGAATAA
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| Protein sequence | MEFLKRNEAP LSESDWEKID KVVVETAKRV LVGRRFIEIS GPYDPSVQFV PYDYIEDGNS
GACGLFGEVD CGVVKVKERK ILPLPIIYKD FKIHWRDVES SKKFNIPIDF SVAAAAASQV
AIAEDRLIFH GDIETGFPGL LNVEGKNSIS ISDWNQTGEA FKDILNAIVK LNENGFYNNF
ALVLNPQDYA MLNRLYGNSG ILEIDQIKKL FDVGVFTTPV IPQFTAVVVS TGIENLDLFI
SQDMITSYLN YDNMDHYFRV FEILALRIKR PQCICTIE
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