Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0042 |
Symbol | |
ID | 6331770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 51078 |
End bp | 51617 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642656320 |
Product | protein of unknown function DUF882 |
Protein accession | YP_001930245 |
Protein GI | 188995994 |
COG category | [S] Function unknown |
COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.004948 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAA GAGATTTTTT AAAATTCGGC TTAATTACAG GTTTTTGTGT ACTGGTTCCA AAATCCTTTG GTAGTATTGT TAATAGTTAC TTCCAAGCAA GAATTCTTTA TTTTTATAAT ACACATACAG GAGAATTTTT AAAAGAGATA TTTTACGAAA ATGGAAGGTA CAATGAAGAA GGTTTAAAGA ATATTTTTTA TATTTTAAGG GATTTTAGAA CTAATGAAAT TGCTGAAATT GATATAAAAT TAATAGATAC ACTTTACATA TTAACAAAAA CTTTAGAAGT AAACAATAGA CCCATAAATA TCATTTCTGG GTATAGATCT CCAAAAACAA ACAATCTTTT GAGAGAATTA AGTTCAGGGG TTGCAAAAAA TAGCTTGCAC ATGCAAGGGA AAGCAATTGA TATAAACATT TCTGGAGTTC CATTACATAT TTTAAGAGAT GCGGCAATAT CCCTCAAAGC TGGTGGTGTA GGATATTACC TATCTTCTAA TTTTGTGCAT ATAGACACTG GAAGAATAAG ATATTGGTAA
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Protein sequence | MNRRDFLKFG LITGFCVLVP KSFGSIVNSY FQARILYFYN THTGEFLKEI FYENGRYNEE GLKNIFYILR DFRTNEIAEI DIKLIDTLYI LTKTLEVNNR PINIISGYRS PKTNNLLREL SSGVAKNSLH MQGKAIDINI SGVPLHILRD AAISLKAGGV GYYLSSNFVH IDTGRIRYW
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