Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1823 |
Symbol | |
ID | 4437583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1700048 |
End bp | 1701079 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639677403 |
Product | transporter component |
Protein accession | YP_821146 |
Protein GI | 116628527 |
COG category | [R] General function prediction only |
COG ID | [COG2391] Predicted transporter component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00974172 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACGA CTGCTCTTTC TGGTGGGATC ATTGGTCTGA TATTTGGATT CATTTTGCAA CGAACTCGTT TTTGTATGAC GGGTGGTTTT CGAGACATGT ATATTGCACG TAATAATACC TTATTTTACG CTTTCCTTAT TGCAATCACA GTAGAAAGTA TAGGAGTGCT TTTCCTGATT AAATTAGGTA TTGTTGGAAA TCCTTATGAA GAATTTTCCG TGTTAGGAGC AATTGTGGGT TCCTATCTAT TTGGTATTGG AATTGTTCTT GCTGGGGGAT GTGCCACAGG AACGTGGTAT CGTGCCGGTG AAGGACTCTT AGGTAGCTGG GTTGCACTAT TTTTTTATAT GACAAGTGCA GCAGCTATGA AATCAGGATT TCTTGTTCCT TTGAATCAAT TAATAGCCAA GCGATGGGTA ATTAATGATG ATTTAGCTGG TCAATTAGGA ATTCCGGTTT GGTATTTTCT TGTTTTCTTA GTAGCTATAA CAAGTTTCTT TGTAATTCGA GAGTTACGTA AGCCCAGACG TCAGATTGCT TCGCTTCCAT CAAAATATAA GGGAGTGAGA CACTATCTTT TTGAGAAAAC TTACCATAAA TATTTTGCAG GACTTCTAAT AGGTCTTGTT GCTTTTATTG CTTGGCCTGC TAGTCAGTTG ACGGGTCGTG TTGGAGGGTT AGGGATTACA ACTCCATCAG CACATCTAAT TAGTTATATT ATTACAGGTG ATAGTAAACA GCTTGGTTGG GGTGTTTTTC TTGTATTGGG GATTTTTCTT GGTTCCTTTC TTGCTGCAAA GGGTTCTCGA GAGTTTCGTT GGCGCTTGCC AGACTTGTCA ACCATCGGTA AGAGCACACT AGGGGGTATT TTTATGGGAA TCGGTGCTTC ATGGGCTGGT GGCTGTACGA TTGGTAATGG TTTAACAGCT ACAGCAATTT TTTCCAGTAA GGGATGGATT GCTTTACCAG TGACTATTTT AGGTGTTTGG ACGGCTTCCC ACATTATCTT TGTAAAACCC AACAAAAATT AA
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Protein sequence | MLTTALSGGI IGLIFGFILQ RTRFCMTGGF RDMYIARNNT LFYAFLIAIT VESIGVLFLI KLGIVGNPYE EFSVLGAIVG SYLFGIGIVL AGGCATGTWY RAGEGLLGSW VALFFYMTSA AAMKSGFLVP LNQLIAKRWV INDDLAGQLG IPVWYFLVFL VAITSFFVIR ELRKPRRQIA SLPSKYKGVR HYLFEKTYHK YFAGLLIGLV AFIAWPASQL TGRVGGLGIT TPSAHLISYI ITGDSKQLGW GVFLVLGIFL GSFLAAKGSR EFRWRLPDLS TIGKSTLGGI FMGIGASWAG GCTIGNGLTA TAIFSSKGWI ALPVTILGVW TASHIIFVKP NKN
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