| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1774 |
|---|
| Symbol | |
|---|
| ID | 4437640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1658778 |
|---|
| End bp | 1659554 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639677360 |
|---|
| Product | deoxyribonuclease, putative |
|---|
| Protein accession | YP_821108 |
|---|
| Protein GI | 116628489 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA TTTTTGATAC ACATACCCAT CTTAATGTAG ATAATTTTGC AGGAAAAGAA
CAAGAAGAAG TGGATTTTGC AGCTGAACTT GGTGTTGTTA AAATGAATAT TGTTGGTTTT
GATAAAGCGA CAATTAAGAA GTCTTTAGCA CTGTCAGAGC AATACGACCA GCTATATAGT
ACAATCGGAT GGCATCCTAC AGAAGCAGGA TCATATACTC AGGAAATTGA GGATATGATT
GTGTCACAAT TGGGAAATCC GAACGTAGTG GCACTTGGGG AGATTGGTTT GGACTATTAT
TGGATGGAAG ATTCTAAGGA GGTTCAGATT GAGGTCTTTA AGCGTCAAAT AGCCTTGTCA
AAGGAATATA ATTCGCCTTT CGTTGTACAC ACACGTGACG CAATAGAGGA TACTTACGAG
ATTATTAAAG AAGTTGGGGT TGGTCCTTGT GGTGGGATTA TGCACTCATA CTCAGGGTCC
CTAGAGATGG CTCAAAAATT TGTTGAGCTC GGTATGATGA TTTCATTTTC AGGTGTTGTA
ACTTTTAAGA AGGCTTTGGA TGTTCAAGAA GCTGCTCAGT ACTTACCTTT AGATAAGATT
TTAGTTGAAA CAGATGCACC GTATCTAGCA CCTGTGCCAA AACGTGGTCG TGAAAATCGT
ACAGGGTATA CACGTTACGT GGTGGATAAG ATTGCCGAGC TTCGTGGTTT AACAAGTGAA
GAGGTTGCAA GAGTTACTTA TGACAATGCG ATGAGGATTT TTGGTCTGAA TGAGTAA
|
|---|
| Protein sequence | MIKIFDTHTH LNVDNFAGKE QEEVDFAAEL GVVKMNIVGF DKATIKKSLA LSEQYDQLYS
TIGWHPTEAG SYTQEIEDMI VSQLGNPNVV ALGEIGLDYY WMEDSKEVQI EVFKRQIALS
KEYNSPFVVH TRDAIEDTYE IIKEVGVGPC GGIMHSYSGS LEMAQKFVEL GMMISFSGVV
TFKKALDVQE AAQYLPLDKI LVETDAPYLA PVPKRGRENR TGYTRYVVDK IAELRGLTSE
EVARVTYDNA MRIFGLNE
|
|---|
| |