Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1766 |
Symbol | |
ID | 4437632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1652579 |
End bp | 1653520 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639677352 |
Product | HD-superfamily hydrolase |
Protein accession | YP_821101 |
Protein GI | 116628482 |
COG category | [R] General function prediction only |
COG ID | [COG3481] Predicted HD-superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00925857 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA ATCAAATGAA AAAAGATGAG TATTTTGAAG GCTTTTATCT GATTAAGCGT GCAGAAGTAC GTAAGACACG AGCGGGAAAG GACTACATTG CCTTTACCTT CCAGGATGAT TCTGGTGAGA TTTCAGGAAA TTTATGGGAT GCTCAGCCTT ATAATGTTGA AGAATTTACA GCTGGTAAGG TAGTCCATAT GAAAGGACGC CGAGAGGTTT ATAATAACAC GCCTCAAGTC AATCAAATTA CCTTGCGACT CCCTTTATTT GGTGAACCGA ATGATCCGGC TGATTTTAAG GGAAAGCCAC CGGTAAATTT ATCCGAAGTG CGTGAATATC TTGAGCAGAT GATTTTCAAA ATAGAGGAAG CTACGTGGCA ACGTGTGGTC CGTGCCCTTT ATCGTAAGCA TAATAAGGAG TTTTTTAGTT TTCCTGCTGC TAAAACAAAC CATCATGCCT TTGAAAGTGG ATTAGCTTAT CATACAGCGA CTATGATTCG CTTGGCTGAT AGTATTGGAG ATATTTATCC AGAGCTAAAT AAGAGTTTGC TCTTTGCAGG AATTATGCTA CATGACCTAG CTAAGGTCAT TGAATTAACT GGTCCTGAAA ATACAGAATA TACCGTTCGT GGAAACTTGA TTGGTCACAT AGCTTTGATT GATGAAGAAA TCACCAAAGT TCTTGTCGAG CTTAATATTG ATGATACACG TGAGGATGTT GTTGTTTTAC GTCATGTCAT TTTAAGTCAC CACGGGCAAT TGGAGTATGG AAGTCCAGTT CGTCCTCGTA TCATGGAAGC GGAGGTTATC CATATGATTG ATAATCTCGA TGCTAGTATG ATGATGATGA CGACAGCTCT TAACTTAGTT GGACCAGGAG AGATGACTAA TCGTCTATTT GCCATGGATA ACCGTTCTTT CTATAAGCCA AAATGTGATT AG
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Protein sequence | MKINQMKKDE YFEGFYLIKR AEVRKTRAGK DYIAFTFQDD SGEISGNLWD AQPYNVEEFT AGKVVHMKGR REVYNNTPQV NQITLRLPLF GEPNDPADFK GKPPVNLSEV REYLEQMIFK IEEATWQRVV RALYRKHNKE FFSFPAAKTN HHAFESGLAY HTATMIRLAD SIGDIYPELN KSLLFAGIML HDLAKVIELT GPENTEYTVR GNLIGHIALI DEEITKVLVE LNIDDTREDV VVLRHVILSH HGQLEYGSPV RPRIMEAEVI HMIDNLDASM MMMTTALNLV GPGEMTNRLF AMDNRSFYKP KCD
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