| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1681 |
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| Symbol | |
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| ID | 4437683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1567658 |
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| End bp | 1571311 |
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| Gene Length | 3654 bp |
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| Protein Length | 1217 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639677271 |
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| Product | ATP-dependent exoDNAse beta subunit |
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| Protein accession | YP_821020 |
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| Protein GI | 116628401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACTA AAGCTTTTTT AAGTCCAGCA GAGATTGAGG AACGTATTGC CCAAGAAGCA
GCTTCTGACA AGGATCGCAA GTTAACACCA GAACAGATTG AAGCTATTTA CAGTAATGGT
ACTAATATTT TGGTATCTGC CTCAGCTGGT TCAGGGAAAA CCTTTGTCAT GGTTGAGCGT
ATCCTTGATA TGATTGGACG TGGCGTTGGT ATTGATCAAC TCTTTATCTC AACCTTTACG
GTAAAAGCTG CAGGTGAGTT AAAGGAGCGT CTGGAAAAGC GGCTGACAAA GCATTTAGGA
CAGGCAGAGA CGGATGAGGA GCGGGCATTT CTTTCAGACC AGATTGCCAA GATTGGGACG
GCTGATATTG GAACCATGGA TGCCTTTACC CAGAAATTGG TCAATCAGTA TGGCTATCTC
CTGGGTGTGT CACCTACTTT CCGTATCATG ACAGACCTTG CTGAGCAGAC GCTTATGAAA
AATGAGGTTT ATGCTGATCT CTTCAATGAT TATATGCAAG GAAAGGATGC CCAACTTTTT
CAAAAATTGG TCCGTAATTT CACTGGACAT AGCAAAACTA GCAAGGCTTT TCGTGATTTA
GTTTACGATA TTTACAGCTT TTCTCAGGCT ACTGCAGATC CTGAAAAATG GCTACGTCAA
AATCTCTTGA AAGGACAGAT CGAGGCTAAG CCAGAACAGG CTAAAAATGA GCTTTTAGAC
AGTCTTAAAG ATGGATTGTT GGCTGATTTC CTAGCTTTCT TAAGAGACCA TTTAGGTATA
GCTCAGCGTG AATTTGCCAA GGCCAAGTAT CTGAATAATG TGTCAGATGC CATTATCCTT
CTTGAGGGCT CCTTGATTAA TGACCAAACT GATATGGAGG ACCTCCTCAA ACAACTATTG
ACTCTGTCAG GAGGTACTGG TTTGACCAAT ATGACCCGTC CTAAAGACGA GGAACTCAAG
GCCTACAAGG AAGCATACAA CAAGACCAAA AATGAGTTTG TGGCTCAGTT GCGAGAGGTC
GATACTCAGC TCACCGTTCT GGAGGTTTTG GCCAAGCATA ATGATGATAT CCTACCTATG
TTGGAGCTAC TTCAGTCCTT TGTACTTGAT TTTTCGGATC AGTATTTACA GGCAAAGATT
CAGGAAAATA CCTTTGAATT CTCGGATATT GCCCACTTTG CTATCCGTAT TTTGGAAGAA
AATCCAGAGG TGGCAGTCAG CTACCGGGAC CGTTACCATG AAGTTATGGT GGATGAGTAT
CAGGACAATA GCCATACTCA AGAACGAATG TTGGAACTTC TATCTAACGG CCATAACCGA
TTCATGGTGG GAGATATCAA GCAGTCCATT TATCGTTTCC GTCAGGCAGA CCCTCAGATT
TTTAATGATA AGTTTCAGCT TTTCCTTGAA AATCCTGATG CAGGTAAGCT GATTCTCCTT
AAGGAGAACT TTCGTAGTCA ATCTGAAGTC CTTGATGCGA CAAATGGTGT TTTTAGCCAC
CTCATGGATC AGGAAATCGG GGACATCCTA TATGACAAGA CTCATATGTT GGTAGCAGGT
AGTCAGAAGC AAAAAGAGCC CCATCCTGAA AATGAAACTG AGGTTCTGAT TTATAATAGT
GATGAATCTA GTACGAGTGA GGATGAAGAA GGTCCTGATC AAGCTATCAG CAGCGGTGAG
ATTTCCTTGG TTATCAAAGA AATTATCAAA CTTCATGAGC AGGGTGTACG TTTTGAGGAC
ATCACCCTCC TAGCACCGAA CCGTAACACC TATCTGGACT TGATGGTAAG TTTCGAGGAA
CACGGTATTC CCTTGGTTCC TGACGAGTAT AAGTCAAGCT ACCTAGAGTC ACTAGAAGTT
ATGATTATGT TGGACACCCT TCGTGCTATC AATAATCCTC TTAACGATTA TGCTCTCGTT
GCTCTCCTTC GTTCACCTAT GTTTAACTTC AACGAGGATG ACCTGACTCG TATCGCAGTT
CAGGCTGACA AAGGCCAATT CTATGATAAG CTTCTTGCAG CTCATACCAA ATCAGGCCTT
CATCCGGAAG TTGTGATGCA AGGACTTGAT GCCAAGTTGA CTCTCTTCAC AGAGACTCTG
GCAGATTGGC GTGACTACAG TAAGTGTCAT TCGATTTATG ACCTCATTTG GAAGATTTAC
AACGACCGTT TCTATTATGA TTACGTCGGA GGTCTTCCAC GAGCTGAGCA ACGCCAGGCC
AATCTTTATG CCCTTGCCTT GCGTGCTAAT GCTTATGAAA AGACAGGATT TAAGGGGCTT
TCTCGTTTTA TTGGCATGAT TGATAAGATT ATTGCTAGCG GTAACGACCT AGAGGAAGTG
ACAGATTTGG TTCCCAAAAA TGCCGTTAGC CTCATGACCA TTCACAAGTC CAAGGGGCTA
GAGTTCAAGT ATGTCTTTGT CCTGCAGATG AATCGCAAGT TCATTGGTCA CAGCAAGGAT
GGCCTGAGCG GTAAGTATAT TATCAATCGT GAAAAAGGGC TTGGTATTAA GTATCTAGCT
GACCTCAAAG ACCAGATAAA CACCAATTTG CCTAAGTTAA ATGTTGTTCT TGAGACCTTG
ACCTTCCAGG AAAATCGTAG GGAAGAGCGC AGGGCAAGTA TTTCAGAAGA GATGCGTCTA
CTCTATGTGG CAATGACACG TGCAGAGAAG AAACTCTACC TAGTTGGTAA GGGAAGTAAG
GAAACCTTAA CCCAGCAGTA TGGCACTAAT GTCGAAAATA ATCGCCTACC AGTGGCTATA
CGTGACCAGA TTGCTACTTA TCAGGATTGG ATTATGGCAC TTGATACTGC TTTTATGAGA
AAGGACCTCA AGTTTACTGT TCGCTTTGTT GAGGCTGAGG AGTTGACGCC AGAGGCTATT
GGTCAGGTTG AAGTTCAAGC AGCAGTGGAT GCTGATGATC TATCTAACAA TCGTCAGACG
GAAGATATTA AGCGTGCTCT AACTGTCTTA GAAAGTGTTG AAAAACTCAA CCAGCTTTAT
GCACCAGCGA TTGACCTACC TTCTGTGCGT ACCCCAAGCC AGCTCAAGAC CCTTTACGAA
CCAATTATGG ATACAGAGGG CGTAGATATC ATGGATAAGA AAGAGGGAGT GCAACCTCTT
GAGACGGCTA GCACCTTTGA GCTTCCAGAC TTTGGGCAAA AAACTAAGGT CACTGGAGCT
GCAGTTGGTT CAGCCACCCA TGAACTCATG CAACGCTTGA TTCTTTCTGA CAAGGTGACC
CTCCAAGATT TGACACAGGC GTTGAGTCGG GTATCGGCAG ATGATCAAGT TAAGGCGCGT
GTGCAGTTAG AAAAGCTACT AGGCTTCTTT GACACCGAAC TTGGGAAGCT CATTCTAGCT
AACCGTGGTA AGTTGCGTCG TGAAGCACCA TTTGCTATGT TGGCAGAAGA TCCCGCTAGT
AAAGAAGACT TTGTCGTCCG TGGTATCATC GATGGCTACC TTCTTCTTGA AGACCGTATT
GTCCTCTTTG ACTACAAGAC CGACCACTTC ACTCATCCTA GTGAGCTTAA GACACGCTAC
CAAGGGCAAA TGAGCCTCTA TGCTAAAGCG CTTAGCCAAG CCTATCAAAT GGAAAAGGTC
GACAAATATC TTATCCTCTT GGGTGGAAAG GACTTAGAAG TTGTAGAAGT ATAA
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| Protein sequence | MLTKAFLSPA EIEERIAQEA ASDKDRKLTP EQIEAIYSNG TNILVSASAG SGKTFVMVER
ILDMIGRGVG IDQLFISTFT VKAAGELKER LEKRLTKHLG QAETDEERAF LSDQIAKIGT
ADIGTMDAFT QKLVNQYGYL LGVSPTFRIM TDLAEQTLMK NEVYADLFND YMQGKDAQLF
QKLVRNFTGH SKTSKAFRDL VYDIYSFSQA TADPEKWLRQ NLLKGQIEAK PEQAKNELLD
SLKDGLLADF LAFLRDHLGI AQREFAKAKY LNNVSDAIIL LEGSLINDQT DMEDLLKQLL
TLSGGTGLTN MTRPKDEELK AYKEAYNKTK NEFVAQLREV DTQLTVLEVL AKHNDDILPM
LELLQSFVLD FSDQYLQAKI QENTFEFSDI AHFAIRILEE NPEVAVSYRD RYHEVMVDEY
QDNSHTQERM LELLSNGHNR FMVGDIKQSI YRFRQADPQI FNDKFQLFLE NPDAGKLILL
KENFRSQSEV LDATNGVFSH LMDQEIGDIL YDKTHMLVAG SQKQKEPHPE NETEVLIYNS
DESSTSEDEE GPDQAISSGE ISLVIKEIIK LHEQGVRFED ITLLAPNRNT YLDLMVSFEE
HGIPLVPDEY KSSYLESLEV MIMLDTLRAI NNPLNDYALV ALLRSPMFNF NEDDLTRIAV
QADKGQFYDK LLAAHTKSGL HPEVVMQGLD AKLTLFTETL ADWRDYSKCH SIYDLIWKIY
NDRFYYDYVG GLPRAEQRQA NLYALALRAN AYEKTGFKGL SRFIGMIDKI IASGNDLEEV
TDLVPKNAVS LMTIHKSKGL EFKYVFVLQM NRKFIGHSKD GLSGKYIINR EKGLGIKYLA
DLKDQINTNL PKLNVVLETL TFQENRREER RASISEEMRL LYVAMTRAEK KLYLVGKGSK
ETLTQQYGTN VENNRLPVAI RDQIATYQDW IMALDTAFMR KDLKFTVRFV EAEELTPEAI
GQVEVQAAVD ADDLSNNRQT EDIKRALTVL ESVEKLNQLY APAIDLPSVR TPSQLKTLYE
PIMDTEGVDI MDKKEGVQPL ETASTFELPD FGQKTKVTGA AVGSATHELM QRLILSDKVT
LQDLTQALSR VSADDQVKAR VQLEKLLGFF DTELGKLILA NRGKLRREAP FAMLAEDPAS
KEDFVVRGII DGYLLLEDRI VLFDYKTDHF THPSELKTRY QGQMSLYAKA LSQAYQMEKV
DKYLILLGGK DLEVVEV
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