| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1649 |
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| Symbol | |
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| ID | 4437710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 1537178 |
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| End bp | 1537915 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639677241 |
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| Product | response regulator |
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| Protein accession | YP_820990 |
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| Protein GI | 116628371 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000960447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGATTT ACCTATTAGA AGATAATTCT ATTCAGATGG GTCGCTTGGA AGATGCTGTA
GCACATGAAC TTATGACCTT CGGAAAAGAT CTATCCTGTG TCCAGTCTTT TGACAAACCT
GACCAGTTGT TATCAGCTAT CACTTCTAAT ACAAGCGATC AGATTTTCTT TCTTGATATT
GAAATTAAAG GTGAAGATAA GAAGGGACTT GATATCGCTA AAATCATACG TCAAAATAAC
CCTTATGCTA TCATTGCCTT TGTCACTACA CATATAGAGT TCATGCCTCA AGCTTTTGGC
GTTACAGCCT ATAAATACAT CAATAAAACC TTAGATGAAG CTAGCTTTAG AAAAGAAATA
GGGGAAACCA TTGCTCAAGT CTTCCCTATT AACGCAACTA CCACGGATGA GTTTTTTCTC
TACAAAACAG AGTCTCAATT AATAAACCTT CCTATGGATC AAATTCTATA CCTATCCACA
TCAGATATCA AACACCATGT TCACCTCCAG ACTATCCATA CCCTCATGGA TATCCGAGCA
AATCTGGCAG ACTTTAAAAA GATACACAAA AAGCTCTACC CATGCCATCG GTCCTATATC
GTCAATACAG ATATGATTAT CTCTGTCAAC TTGACCAATT ATGAAGCTAC CTTAATTAAT
GGTCAAGTCC TACCAGTATC CCGTATGAAG ATAGGAAAGA TTGCACAGAT TGTTGAGGAA
AGAGGCAGAG GATGTTAA
|
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| Protein sequence | MKIYLLEDNS IQMGRLEDAV AHELMTFGKD LSCVQSFDKP DQLLSAITSN TSDQIFFLDI
EIKGEDKKGL DIAKIIRQNN PYAIIAFVTT HIEFMPQAFG VTAYKYINKT LDEASFRKEI
GETIAQVFPI NATTTDEFFL YKTESQLINL PMDQILYLST SDIKHHVHLQ TIHTLMDIRA
NLADFKKIHK KLYPCHRSYI VNTDMIISVN LTNYEATLIN GQVLPVSRMK IGKIAQIVEE
RGRGC
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