Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1572 |
Symbol | |
ID | 4437808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1474027 |
End bp | 1474758 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639677169 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_820918 |
Protein GI | 116628299 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAT TAGAAAAGGT GACGGGTGGT TACGCTAATA TTCCCGTCCT AAAAGATGTG ACTTTTGAGG TGGCTGATGG TGAATTGGTT GGTCTCATTG GTCTTAATGG TGCTGGAAAA TCAACAACAA TTAACGAGAT TATTGGTCTC TTAACACCCT ATGGAGGACA GATTGCCATT GATGGGTTAA CTATTCAACA AGATCCAGCT AGCTATCGTC AGAAGATTGG CTATATTCCT GAAACGCCAA GTCTTTATGA AGAATTGACG CTTCGTGAAC ATTTGGAAAC GGTGTTGATG GCCTATGGTC TTGATGTGAC TGAGGGTATG GCACGTGCGG ACAAGTACCT CAAACTCTTT CGCTTAGATG AAAAGTTGGA CTGGTTCCCA ACTCAGTTTT CAAAAGGGAT GAAGCAGAAG GTCATGATTA TCTGTGCCTT TATTGTGAAT CCAAGTCTTT TCATTGTTGA TGAGCCCTTT TTGGGATTGG ATCCCTTGGC GATTTCTGAT TTGATTGAGC TTCTGGCTGA GGAAAAAGCC AATGGCAAGT CTATTCTCAT GTCGACTCAC GTTTTGGATT CAGCTGAGAA GATGTGTGAT CGCTTTGTGA TTTTGCACCA TGGACAGATC TTGGCACAGG GGACGATTGA TGAGCTTCGT CAGACCTTTG GTGACAGTAG TGCTAGTCTT AACGATATCT ATATGCAGTT GACTAAGGGA GAATTGTCAT GA
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Protein sequence | MLKLEKVTGG YANIPVLKDV TFEVADGELV GLIGLNGAGK STTINEIIGL LTPYGGQIAI DGLTIQQDPA SYRQKIGYIP ETPSLYEELT LREHLETVLM AYGLDVTEGM ARADKYLKLF RLDEKLDWFP TQFSKGMKQK VMIICAFIVN PSLFIVDEPF LGLDPLAISD LIELLAEEKA NGKSILMSTH VLDSAEKMCD RFVILHHGQI LAQGTIDELR QTFGDSSASL NDIYMQLTKG ELS
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