| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1541 |
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| Symbol | |
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| ID | 4437854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1444359 |
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| End bp | 1445036 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639677139 |
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| Product | ABC-type amino acid transport system, permease component |
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| Protein accession | YP_820889 |
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| Protein GI | 116628270 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00154011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGATT CGGGCTTTCA GGTTCTTCTT CAGGGGAATA ATTTCCTACG TATCTTACAA
GGTTTAGGCG TAACTATTAG AATTTCCATC GTTTCGGTGC TTCTGTCCCT CTTACTAGGA
ACCCTTTTTG GGATTGTCAT GACTTCGAAG TCTAAGATTG TTCGGTTTTT GTCACGAATT
TATCTAGAAT TTATTCGTAT CATGCCCCAA TTAGTTTTGC TCTTTATTGT CTATTTTGGT
CTGGCTAGGA ACTTTAACAT CAATATCTCA GGTGAGCTAT CGGCTATTAT CGTCTTTACC
CTTTGGGGAA CGGCTGAGAT GGGCGATTTG GTGCGTGGGT CAATCACGTC GCTACCGAGA
CACCAGTTTG ATAGTGGGAG GGCTCTTGGC TTGACCAATG GGCAACTCTA CACCTATGTC
ATTATTCCGC AAGTCCTGCG TCGCTTGTTG CCTCAGGCTA TTAACCTGGT GACACGGATG
ATTAAGACCA CATCTTTGGT GGTTTTGATT GGCGTGGTTG AGGTGACCAA GGTTGGTCAG
CAGATTATCG ATAGTAACCG CCTGACTATT CCAACAGCTT CTTTCTGGAT TTATGGTACA
ATTTTGATTC TTTATTTTGC CATTTGTTAC CCAGTATCTA AGCTGTCTAC ATATCTTGAA
AATCGTTGGA GGAATTAA
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| Protein sequence | MQDSGFQVLL QGNNFLRILQ GLGVTIRISI VSVLLSLLLG TLFGIVMTSK SKIVRFLSRI
YLEFIRIMPQ LVLLFIVYFG LARNFNINIS GELSAIIVFT LWGTAEMGDL VRGSITSLPR
HQFDSGRALG LTNGQLYTYV IIPQVLRRLL PQAINLVTRM IKTTSLVVLI GVVEVTKVGQ
QIIDSNRLTI PTASFWIYGT ILILYFAICY PVSKLSTYLE NRWRN
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