| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1518 |
|---|
| Symbol | |
|---|
| ID | 4437870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1421836 |
|---|
| End bp | 1422381 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639677117 |
|---|
| Product | GNAT family acetyltransferase |
|---|
| Protein accession | YP_820867 |
|---|
| Protein GI | 116628248 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000034512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT GGACTAGTCT GGGTGCTTTT GCCTTCTTTG AGTCGGAGCG CCTTTCTTTT
AGACCACTCG TCTTTTTAGA TCGTTTTGAC TTACATGAGA TTGTGTCAAA TCCAGAGAAT
TTACAATTTT TCTTTCCTGC TACGCAAACT CAGTATGAAA CAGATTGCCT CTTGGTACAT
TATTTCATGA AGGAGGCTTT GGGTGTTTGG GCAATTGTAG ATCGAGAGTC TAATAAGTTG
ATTGGGATTG TTCGCTTTGA AAAGATAGAT GTCCAGAAAA GGACTGCAGA GCTCGGTTAT
TTTTTGAATG CTTTATACTG GGGTAGAGGT ATAATGACTG AGACAGTTAC TTGTTTGTCA
GATTTGGCAT TGACAGCTAT GGGAATGGAA CGCATTATCC TTATTGCTCA TTTGGAAAAT
AAGGCATCGA TTCGTGTGGC AGAAAAGTCT GGCTTTAAAC TGGTGTCTCG TTTCAAAGGA
GCAGACCGAT ACACCCGTAC CATGCGAGAT TATCTCCGCT TTGAGAAGGA GAAGAACTGT
GAGTAA
|
|---|
| Protein sequence | MDIWTSLGAF AFFESERLSF RPLVFLDRFD LHEIVSNPEN LQFFFPATQT QYETDCLLVH
YFMKEALGVW AIVDRESNKL IGIVRFEKID VQKRTAELGY FLNALYWGRG IMTETVTCLS
DLALTAMGME RIILIAHLEN KASIRVAEKS GFKLVSRFKG ADRYTRTMRD YLRFEKEKNC
E
|
|---|
| |