Gene STER_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1478 
Symbol 
ID4437924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1384474 
End bp1385121 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID639677082 
Productphosphoserine phosphatase 
Protein accessionYP_820833 
Protein GI116628214 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG TAAAAGGCTT ATTAGTTATG GATGTAGACT CAACTCTGGT CCAAGAAGAA 
GTAATTGATT TATTGGGGGA AGAGGCTGGT GTTGGTCGAG GGGTCGCTGA AATCACAGAG
CGGGCCATGC GTGGAGAATT AGATTTCAGA CAGGCTTTGA ATGAGCGTGT GGCAACCCTT
AAGGGATTGC CTGACAGTAT ATTTGAGAAG GTCTATGCCC GCATTCATTT CAACAAGGGA
GCCAAGGAAC TTGTGGATGA ACTCCACTCA CGTGGCTTCA AGGTAGGTTT AGTTTCTGGT
GGTTTCCATG AGACAGTTGA TAGACTGGCA AGAGAGGCAG GTATTGATTA TGTGAAGGCC
AATCACCTTG AGGTGATCGA TGGTTTCTTA ACTGGAAAGG TTTATGGTGA GATTGTTACC
AAAGATGTCA AGGTAGCTAA GCTTAAAGAT TGGGCAGCGG AAAATGGACT TAAACTCTCT
CAAACCATTG CTATGGGTGA TGGAGCCAAT GATTTGCCTA TGATTAAGAC AGCCGGCATA
GGCATCGCCT TTTGTGCCAA ACCAATTGTC CGTGCACAAG CTCCTTATCA GATCACAGAA
CCAGATTTGT ATAAGGTCAT TGAGATCTTG GATGAGGTGG GAAAATAG
 
Protein sequence
MSEVKGLLVM DVDSTLVQEE VIDLLGEEAG VGRGVAEITE RAMRGELDFR QALNERVATL 
KGLPDSIFEK VYARIHFNKG AKELVDELHS RGFKVGLVSG GFHETVDRLA REAGIDYVKA
NHLEVIDGFL TGKVYGEIVT KDVKVAKLKD WAAENGLKLS QTIAMGDGAN DLPMIKTAGI
GIAFCAKPIV RAQAPYQITE PDLYKVIEIL DEVGK