Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1394 |
Symbol | |
ID | 4438015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1302014 |
End bp | 1303342 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639677003 |
Product | RNA-binding protein |
Protein accession | YP_820754 |
Protein GI | 116628135 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTGG CCAATGATTG GAAAAAAACA GCCCGTGGAC AGGCACTTGA AGTTTTAGAA GAAGTCTTTC AAGAAGGGGC TTACTCAAAT ATTGCCCTCA ATGCACGTCT GAGCAATTCA TGTCTAACAG ATAAGGACAA GGCCCTGGTA ACGGAAATTG TTTATGGAAC TGTTGCCCGT AAGATCACTT TGGAATGGAT CTTAGCCCAT GTCATTGAGG ATCGAGATAA ACTTGAAGCT TGGGTCTATG ACCTATTGCT TTTGAGTCTT TACCAGTTGG CCTACTTGGA TAAGATTCCA TCCCATGCGG TGGTTAACGA TGCCGTTTCT ATTGCCAAAA ATCGTGGCAA TAAAAAAGGA GCTGAGAAGC TGGTGAATGC AGTTCTTCGC AAACTATCTA GCCAGCCATT GCCAGATCCA AGCAAGATTA AACGTGTCAA TAAACGCTAT TCTGTTCAAT ATTCCCTACC TGTATGGTTG GTGAAAAAGC TTATTGAGCA GTATGGGGAA GAGCGAGCCC TTGCTATTTT CCAAAGTCTC TTTGTGAGAA ACAAGGCCAG TGTCCGTGTG ACGGATGTGT CCCGTATGGA AGAAATTGCG GAGGCCACTG GAGCTGAGCG TTCAGATTTG TCACCAGTTG GGCTTGTTAA GTCTTCGGGT TATTTTGCTG GGACTGATTA TTTTAAAGAG GGGTTATTGA CCATTCAGGA TGAGACTAGT CAGCTAGTTG CACCAACTTT AGCAATTCAA GGTATGGAAG AAATCCTGGA TGCTTGTGCG GCACCCGGAG GTAAGACTGT CCATATGGCA TCATACTTGA CGAGTGGACA TGTGACGGCT CTTGACCTTT ATGATCATAA GCTTGCTCTT ATTAAAGAAA ATGCACAACG ACTTGGTCTG GCTGATAAGG TTAAAACTCA GAAACTAGAT GCTCGTCAGG TGCATCAAGT CTTTCCGACT GCTAGTTTTG ACAAGATTCT AGTGGATGCT CCTTGCTCAG GGATCGGTCT CATTCGTCGA AAACCAGACA TAAAATACAA TAAGGATCTC CAAGACTTTA AATCCCTCAA GTCTGTGCAA TTGGATATAT TATCCAGTGT TTGTCAAACC CTACGAAAAG GTGGTATAAT AACCTACAGT ACTTGCACCA TCATAGCAGA AGAAAATCAA GAGGTAATTC AGGCCTTTCT TGAGAGCCAT CCTGATTTTG AGCAAGTTGC CTTGGATCAT CCATGCAAGG ACATCGTGGT CAATGGCTAT TTGGCTATCA CCCCCGAACA GTATCTAACT GATGGTTTTT TTATCGCTCA GTTGCGTAAG AAAGTCTAG
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Protein sequence | MSLANDWKKT ARGQALEVLE EVFQEGAYSN IALNARLSNS CLTDKDKALV TEIVYGTVAR KITLEWILAH VIEDRDKLEA WVYDLLLLSL YQLAYLDKIP SHAVVNDAVS IAKNRGNKKG AEKLVNAVLR KLSSQPLPDP SKIKRVNKRY SVQYSLPVWL VKKLIEQYGE ERALAIFQSL FVRNKASVRV TDVSRMEEIA EATGAERSDL SPVGLVKSSG YFAGTDYFKE GLLTIQDETS QLVAPTLAIQ GMEEILDACA APGGKTVHMA SYLTSGHVTA LDLYDHKLAL IKENAQRLGL ADKVKTQKLD ARQVHQVFPT ASFDKILVDA PCSGIGLIRR KPDIKYNKDL QDFKSLKSVQ LDILSSVCQT LRKGGIITYS TCTIIAEENQ EVIQAFLESH PDFEQVALDH PCKDIVVNGY LAITPEQYLT DGFFIAQLRK KV
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