Gene STER_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1387 
Symbol 
ID4437058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1295964 
End bp1296608 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content41% 
IMG OID639676998 
ProductDNA-binding response regulator 
Protein accessionYP_820749 
Protein GI116628130 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00141106 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATA AGATTAATGT AATTTTGGTA GATGATCATG AAATGGTTCG TTTAGGCCTT 
AAGAGTTTCT TGAATCTCCA AGGAGATGTA GAAGTGGTTG GAGAGGCAGA AAACGGCCGT
GAGGGTGTCG ATCTTGCCCT GGAGCTACGA CCAGATGTCG TTGTTATGGA CCTTGTTATG
CCTGAGCTAG ATGGTGTTCA GGCGACTTTG GAATTGCTAA AAGAATGGCC TGAAGCTAAG
ATTCTAGTTT TGACCAGCTA TTTGGACAAT GAAAAAATTT ATCCAGTCAT TGAAGCTGGC
GCCAAAGGCT ATATGCTTAA AACGAGCAGT GCAGCAGAGA TTCTAAATAG TATCCGTAAG
GTTTACCGTG GAGAGGAAGC TATCGAAACT GAGGTAGACA ATAAGATTAA ATACCATGAT
AGTCACCCGA ACTTACATGA TGACTTGACC GCGCGCGAAC GTGATATCTT AGCCCTCCTA
GCTAAAGGCT ATGACAATCA AACCATTGCT AACGAACTTT TTATTTCTTT AAAAACCGTC
AAGACTCATG TGTCTAATAT CCTTGGGAAA TTAAATGTTG ATGACCGTAC TCAGGCTGTA
GTTTATGCCT TTAGACATCA TCTGGTTTCA CAGGATGATG AATAA
 
Protein sequence
MSNKINVILV DDHEMVRLGL KSFLNLQGDV EVVGEAENGR EGVDLALELR PDVVVMDLVM 
PELDGVQATL ELLKEWPEAK ILVLTSYLDN EKIYPVIEAG AKGYMLKTSS AAEILNSIRK
VYRGEEAIET EVDNKIKYHD SHPNLHDDLT ARERDILALL AKGYDNQTIA NELFISLKTV
KTHVSNILGK LNVDDRTQAV VYAFRHHLVS QDDE