Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1367 |
Symbol | |
ID | 4438129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1273959 |
End bp | 1275863 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639676983 |
Product | Na+/xyloside symporter or related transporter |
Protein accession | YP_820736 |
Protein GI | 116628117 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2190] Phosphotransferase system IIA components [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter [TIGR00830] PTS system, glucose subfamily, IIA component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.316422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAT CTAAAGGTCA GATGAAGTCT CGTTTATCCT ACGCAGCTGG TGCTTTTGGT AACGACGTCT TCTATGCAAC CTTGTCAACA TACTTTATCA TGTTTGTGAC AACTCACTTG TTTAACACAG GTGATCCAAA GCAAAATAGT CACTACGTAC TATTAATCAC TAACATTATC TCTATTTTGC GTATCTTGGA AGTATTTATC GATCCATTGA TCGGTAATAT GATTGATAAC ACTAATACTA AGTATGGTAA ATTCAAACCA TGGGTAGTTG GTGGTGGTAT CATCAGTTCT ATCACCTTGT TGCTTCTCTT CACCGATTTA GGTGGTTTGA ATAAAACAAA TCCTTTCTTG TACCTTGTAC TTTTTGGAAT TATCTACCTT ATAATGGATG TCTTCTACTC GATTAAAGAT ATCGGTTTCT GGTCAATGCT TCCTGCCTTG TCTCTTGACA GTCACGAACG TGAAAAAATG GCAACTTTTG CCCGTATTGG TTCTACGATT GGTGCCAATA TTGTAGGTGT TGCCATCATG CCAATCGTTT TGTTCTTCTC TATGACGAAC AGTAGTGGCT CTGGAGATAA ATCTGGATGG TTCTGGTTTG CATTTATCGT TGCACTCATT GGTGTGATTA CATCAATTGC TGTTGGTATT GGTACACGTG AAGTTGAGTC AAAACTTCGT GATAACAATG AAAAAACTAG CCTTAAACAA GTCTTTAAAG TTCTTGGTAA AAACGACCAA TTGATGTGGC TGTCTCTCGG ATATTGGTTC TATGGTCTTG GTATTAATAC ACTTAATGCT CTTCAACTTT ATTACTTCAC ATTTATCCTT GGTGATTCAG GGAAATACTC AATCCTTTAC GGATTGAATA CAGTTGTTGG TTTGGTTTCA GTTTCACTGT TCCCTAGTCT TGCTGGTAAA TTCAACCGTA AACGTTTGTT CTATGGATGT ATTGCAGTAA TGCTCGGTGG TATCGGAATC TTTAGTATTG CAGGTACTTC ACTTCCAATG ATCTTGACTG CAGCTGAACT CTTCTTCATT CCACAACCTC TTGTGTTCCT TGTTATCCTT ATGATTATCT CTGACTCAGT AGAATATGGT CAATGGAAAT TGGGACACCG TGATGAATCA CTTACTTTGT CAGTTCGTCC ACTTGTTGAT AAACTTGGTG GTGCGATGTC AAACTGGCTT GTTTCTACAA TTGCCGTAGC TGCCGGTATG ACAACAGGTG CCTCAGCATC AACAATTACA ACACATCAAC AGTCTATTTT TAAGCTTAGC ATGTTTGGTT TCCCAGCAGC AGCAATGCTT ATCGGTGCCT TCATTATTGC TCGTAAAATC ACTTTGACTG AAGCACGTCA CGCTAAAATT GTTGAAGAAT TGGAACATCG CTTTAGCGTA GCAACTTCTG AAAATGAAGT TAAAGCTAAC GTCGTATCTC TTGTAACCCC TACAACTGGT TATTTGGTTG ATCTCTCAAG TGTTAATGAT GAACACTTTG CTTCAGGTAG CATGGGTAAA GGTTTCGCCA TTAAACCTAC TGATGGAGCT GTCTTTGCAC CAATTAGTGG TACCATTCGT CAAATTCTTC CTACTCGCCA TGCAGTTGGT ATTGAAAGTG AAGATGGTGT CATTGTTCTT ATCCACGTTG GCATCGGAAC AGTTAAACTT AATGGTGAAG GATTCATTAG TTACGTAGAA CAAGGTGATC GTGTTGAAGT TGGACAAAAA CTTCTTGAGT TCTGGTCACC AATTATTGAG AAAAATGGTC TTGATGACAC AGTACTTGTC ACTGTAACTA ATTCAGAAAA ATTCAGTGCT TTCCATCTTG AACAAAAAGT TGGAGAAAAG GTAGAAGCTT TGTCTGAAGT TATTACCTTC AAAAAAGGAG AATAA
|
Protein sequence | MEKSKGQMKS RLSYAAGAFG NDVFYATLST YFIMFVTTHL FNTGDPKQNS HYVLLITNII SILRILEVFI DPLIGNMIDN TNTKYGKFKP WVVGGGIISS ITLLLLFTDL GGLNKTNPFL YLVLFGIIYL IMDVFYSIKD IGFWSMLPAL SLDSHEREKM ATFARIGSTI GANIVGVAIM PIVLFFSMTN SSGSGDKSGW FWFAFIVALI GVITSIAVGI GTREVESKLR DNNEKTSLKQ VFKVLGKNDQ LMWLSLGYWF YGLGINTLNA LQLYYFTFIL GDSGKYSILY GLNTVVGLVS VSLFPSLAGK FNRKRLFYGC IAVMLGGIGI FSIAGTSLPM ILTAAELFFI PQPLVFLVIL MIISDSVEYG QWKLGHRDES LTLSVRPLVD KLGGAMSNWL VSTIAVAAGM TTGASASTIT THQQSIFKLS MFGFPAAAML IGAFIIARKI TLTEARHAKI VEELEHRFSV ATSENEVKAN VVSLVTPTTG YLVDLSSVND EHFASGSMGK GFAIKPTDGA VFAPISGTIR QILPTRHAVG IESEDGVIVL IHVGIGTVKL NGEGFISYVE QGDRVEVGQK LLEFWSPIIE KNGLDDTVLV TVTNSEKFSA FHLEQKVGEK VEALSEVITF KKGE
|
| |