Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1330 |
Symbol | |
ID | 4437117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1235928 |
End bp | 1240316 |
Gene Length | 4389 bp |
Protein Length | 1462 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639676948 |
Product | superfamily II DNA/RNA helicase |
Protein accession | YP_820701 |
Protein GI | 116628082 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCAA ATTTTGATTT TTTAAAAGTA GACTTAGATA CAGCAGAACT TTTTTCAACT GCTAATATGG CGGAAAACAA CTACACTCAA AAGGACTATG AGGGTGTGTT GACTAAAGTT CGAAAGGTTG CAGAAAATAC AGCAGTTTTA TTTGCTGATC GTGCATTCAT TGAATTACCG TCACATTCTA CTTTTCATGA TAAATTACAA ATCATCAAAC ATCATATTAA TAACAAAGAC ATCGTAGATG CATTTTTTGA GATTAAAGGG CATGGAAATA GCTCAGCTCA TAAACTAAAT CCTAAAGATG CAACAAAAGA GAATGCATTA AAATCATTGA AGCAAGTTTA TATGATTTTA GTTTGGTTTG TTACTGAGTA TGTTGATGAT CAAATTAAGG TCTCTTTGTA TGAGAATTTC TTAGAACCTA AAGCTCAAGA GCGTTATACA ACTGCAGAAC GTAAGTTTAT TTATGTACAG ACTGTGAATA ATGAAAGTGG GAAATTTTCT GCTTTTGAAG GGGCTCAAAA AATCGGAGAA GGTACAGTAG CCTCAGACGA TATTGAAGCA GACTGGACAC CTAATAGTGA TTTTTTACGT AGTGTTGCAC CTAAGCGTAT TAAACAATAT ATGACAACTT CTGGCCTTCC TTTTGAGCTT GGATGGGTTG AACTAGCATA TAAAAAATCA ACAAAATCGT GGTTCCATGA CCATGAAGTT CATGAAGTCT TGAGACGTTC AGGTATTAGT CATCCAAAGC ATTTAGAAGG AAATGAGTGG TTTGAAACTG ATTTAGAGAC AGCTAAGGAA GCTATTAAAG CAGTCAAAGA TGGGCGATCA TTTATCAGTG AAACTCAAGC TGCATACAAA GCCGAAAAAG TTAAAATTAC ACTACGTCCT GAACAGGATG CTGCGGTTAA ACAGACACAA AAGACTTATA AGAAAAAAAA CCGTATGCTT TGGAATGCCA AAATGCGTTT TGGTAAAACT TTAACCTCAT TGGAGCTTAT TAAACAAGAA GGCTTTCAAC GTGTTTTAAT CATGACACAT AGACCAGTAG TCCGTGATTC ATGGTTTGAA GACTACAAAA AAATGGAAAT GGCAGAAGCG GGGTATTTGT ATGGATCAGT TGATAAAGGA GAGAAACTAA CTACCCTAAA ATCTGGTGAT AAACCATTTA TTTATTTCAC ATCTATTCAG TATTTACGTT ATAATGGCGC TCAAGCCAAT CTCCCTTTGT TTTCGGATAT AGACTGGGAT TTAATCATCA TCGATGAAGC ACATGAGGGA ACACAGACTG AACTTAGTGA TACTGTCATG AAATCTTTGG TAAAAGACGG TCATACCAAG ATTCTAGAAT TGTCTGGTAC ACCATTTAAT CTGCTTGATC AGTTCGAACC TGAACAAGTC TACACTTGGG ACTATGTGAT GGAGCAACAA GCTAAACTGA AATGGGATTT GGAAAATCCT GAACAACCTA ACCCTTATGA GCAACTTCCA GAGGTACTAA TGTATACCTT TGAGATGAAA CATAAGGAAA AATTTACCGA TGAAAATAAG TCCTTCAATT TCCGCGAATT TTTCAGAGTA GATGATAAGG GTGAATTAGT TTATAAAGCA GATGTCCGAC GTTTTTTGGA TAATATCACT AACCCTGATA GTGAAACTAA TTATCCATTT TCAACAAGAG AATATCGTGA TGAACTCCGT CATACTCTTT GGCTCATGCC GGGAGTTAGA GAAGCCAATG CTTTTGAAAA GCTATTAAAA GAACACCCAG TGTTTGGGAT GGACTATAAG ATTGTTAATG TAGTACGAAA CGATAAGAGT GATAATATCT TAGATACTTC AGGAGATGAT CTTTCAAAGG TACGTCAAGC GATTACGGAT GATCCTTCAC AAACAAAAAC AATCACTTTA ACTGTCCGTA GGTTGACAAC AGGAGTCAAT GTTCCTGAAT GGACAGCGGT GATGTTCCTT TCAAATACAA GTAGCTCAAC GAATTACTTG CAAGCTGCAT TTCGTGCTCA AACGCCGTTC TCTCATGAAA AACTTGGGAT GAAGAAACGT TGTTATATTT TTGATTTTGC TCCAGATCGT GCTTTAACAG TAATGGCTGA GACAGCCCAA ATAAACTCTG GTGTTGGAAA GAAAAATACC CATCAGCAAA AACAGGCGAT GGCGAATTTG CTTAACTTTC TGCCTATCTT AGGTAAAAGT GATAATGGCA TGGAACCATT TAATGTTGAC CGTATGTTGA CTCAAATCAA AAAAGTATAT GCTGAAAAAG CAGTACGTTC AGGTTTTGAA GATGATAGTC TCTACAATGA TAATCTCTTA ACACTAACTT CTGATGATGC AGAACTTTTC AATAAACTAA ATGCTATCGT TGGTAAGACG CAAAAACAAA AAACGCCTAC CAAAGTGACA ATAAACGTTA GTGATTTGAC TGATGAAGAA TATGACCAGG CAGAAAAAGC TAAGAAAAAG AAACCTCGTG AGCGTAGCCA AGAGGAAAAA GAGGCAATGG AGAAACTCAA AGAGGCTCGC AAACAACAAA AAACGATGAT TTCTATCTTA CGTGGAGTTT CTATCCGTAT TCCAATGATG ATCTACGGAA TGGATGTTGA CTTAAGTAAA GATATCACTA TCGAAGACTT TATCAAGGAA GTCGATGATG AATCTTGGAA AGAATTTATG CCTGCTGGAT TCACTAAAGG GATGTTCAAA GAAATTACCA AGTATTATGA TGCAGAGGTC TTTATTGAAG CAGGTCGAAT CATTCGTCAA CGAGCTAAAT CTTTTGATAG TCTTGATTTT ATTGAGCGTG CCGAAGAGAT CGCAACCTTA TTTGGTAGCT TCAAGAATCC TGATAAAGAA ACTGTTTTGA CACCATGGCG CGTGGTCAAT ATGCAAATTG CAAAAGGTAT TGGTGGACTT AATTTCTATG ACGATAACTT TGAGTCAATG ACTGATGGTG CTACACCAAA TCTCCATTGG GTAGAAACAG ATGTTACTGA TAGTGTCTAT CATCCAGAAA CTAAGATTAT TGATATCAAT GCTAAGACAG GGCTTTATCC TTTGCATGCT GCTATGAGTC TCTATTATCA ATATGTACAA AATAATGATG ATAATCGATT TGATGCCGAA AGTGTCTATC GTGGGATCTT AGAAAATAAT ATCTATGCCA TTGCAAAAAC ACCAATGGCT AAGACCATTA CAGAAAGAAC TTTAAAAGGC TATAAGAAAT ATAAGACTAA TGTAGCCTAT ATCGAAAACT TCTCAGATAC ATTAAAATCA AGTATAGAAG AAGGTAAAAA ACAAGTAGAG GAGGCTTTTG GAAAAGTGAA GTTTGATGTT GTGATTGGGA ATCCACCGTA TCAGGAATCA GATAATAAAT CTGGTAATGG AAGCGCCACG CCGTTGTACG ATAAATTTAT AGAACTTTCT ATTGGTATTA AACCTAAGTA TATTTCGTTA ATTACGCCTA GTGTTTGGTT CTTGGGAGGG AAAGGTTTAG ATAATTTTAG AAGAAAAATG CTGGAAGATA TTCATATCAA ATCTTTTCAT AATTATGTCA CACCAAATGA TGTTTTTCAA AATGTAAGTT TAAGAGGAGG AGTTAATTTC TTTGTTTGGG ATGCTAATTT TAATAATACG AAATGCTTCA TACATACGGA GACTATAAAA AACTCTAAGA TAGTAGATAG TTCGGATAGA CCTTATCGCT TACTAGATTT AGATTTGTTT ATTTCTGATA GTAGAGCGTA TACACTTCTC CAGAACATGT TGGAAAGAAA CTATATTAGT TTGGACTTTG AAGATAAGAA ATTAATGTTA TATGGATTTG TTTCAGAGAG AAATCCTTTT GGTATTGCTA CAACGATGAA GGATTTTGGA GAAGAAAATG ATGATAATGA TATAAAAATC TATGCAAGTA AAGGGCGTGT AGGATTTTTA CCTAGGTCCA CAATTAAACG AAATCTGGAA TTAGTTGATT CTTATAAAGT TTTAACTGCA TTTGCAAATA ATATTGGAAC AGATTTGCCA GACGATAATT TGAATACTAT CGTTTCGGAA CCCAAAAGTG CTTGTACAGA AACATATCTG GTTATTGGTG GGAATCTTAA GTTGACCAGA GATACTGCTA ATAATTTATC AAAATATCTA AAAACAAAAT TTGTTCGCAT GTTGATTATG TTAGCAAAGG CAAATCAAAA TGGTACAAGA AAAACCTATA GATTTGTACC TCTTCAAAGT TTTACAAGTG ACTCAGATAT TGATTGGTCA CAATCCATTG CAAAAATCAA TCAGCAATTG TATCGAAAAT ATGAGCTAAG TGAAGAAGAA ATTATCTTCA TTGAAGAAAA TATAAAAGAA ATGGAGTAA
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Protein sequence | MASNFDFLKV DLDTAELFST ANMAENNYTQ KDYEGVLTKV RKVAENTAVL FADRAFIELP SHSTFHDKLQ IIKHHINNKD IVDAFFEIKG HGNSSAHKLN PKDATKENAL KSLKQVYMIL VWFVTEYVDD QIKVSLYENF LEPKAQERYT TAERKFIYVQ TVNNESGKFS AFEGAQKIGE GTVASDDIEA DWTPNSDFLR SVAPKRIKQY MTTSGLPFEL GWVELAYKKS TKSWFHDHEV HEVLRRSGIS HPKHLEGNEW FETDLETAKE AIKAVKDGRS FISETQAAYK AEKVKITLRP EQDAAVKQTQ KTYKKKNRML WNAKMRFGKT LTSLELIKQE GFQRVLIMTH RPVVRDSWFE DYKKMEMAEA GYLYGSVDKG EKLTTLKSGD KPFIYFTSIQ YLRYNGAQAN LPLFSDIDWD LIIIDEAHEG TQTELSDTVM KSLVKDGHTK ILELSGTPFN LLDQFEPEQV YTWDYVMEQQ AKLKWDLENP EQPNPYEQLP EVLMYTFEMK HKEKFTDENK SFNFREFFRV DDKGELVYKA DVRRFLDNIT NPDSETNYPF STREYRDELR HTLWLMPGVR EANAFEKLLK EHPVFGMDYK IVNVVRNDKS DNILDTSGDD LSKVRQAITD DPSQTKTITL TVRRLTTGVN VPEWTAVMFL SNTSSSTNYL QAAFRAQTPF SHEKLGMKKR CYIFDFAPDR ALTVMAETAQ INSGVGKKNT HQQKQAMANL LNFLPILGKS DNGMEPFNVD RMLTQIKKVY AEKAVRSGFE DDSLYNDNLL TLTSDDAELF NKLNAIVGKT QKQKTPTKVT INVSDLTDEE YDQAEKAKKK KPRERSQEEK EAMEKLKEAR KQQKTMISIL RGVSIRIPMM IYGMDVDLSK DITIEDFIKE VDDESWKEFM PAGFTKGMFK EITKYYDAEV FIEAGRIIRQ RAKSFDSLDF IERAEEIATL FGSFKNPDKE TVLTPWRVVN MQIAKGIGGL NFYDDNFESM TDGATPNLHW VETDVTDSVY HPETKIIDIN AKTGLYPLHA AMSLYYQYVQ NNDDNRFDAE SVYRGILENN IYAIAKTPMA KTITERTLKG YKKYKTNVAY IENFSDTLKS SIEEGKKQVE EAFGKVKFDV VIGNPPYQES DNKSGNGSAT PLYDKFIELS IGIKPKYISL ITPSVWFLGG KGLDNFRRKM LEDIHIKSFH NYVTPNDVFQ NVSLRGGVNF FVWDANFNNT KCFIHTETIK NSKIVDSSDR PYRLLDLDLF ISDSRAYTLL QNMLERNYIS LDFEDKKLML YGFVSERNPF GIATTMKDFG EENDDNDIKI YASKGRVGFL PRSTIKRNLE LVDSYKVLTA FANNIGTDLP DDNLNTIVSE PKSACTETYL VIGGNLKLTR DTANNLSKYL KTKFVRMLIM LAKANQNGTR KTYRFVPLQS FTSDSDIDWS QSIAKINQQL YRKYELSEEE IIFIEENIKE ME
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