Gene STER_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1330 
Symbol 
ID4437117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1235928 
End bp1240316 
Gene Length4389 bp 
Protein Length1462 aa 
Translation table11 
GC content35% 
IMG OID639676948 
Productsuperfamily II DNA/RNA helicase 
Protein accessionYP_820701 
Protein GI116628082 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAA ATTTTGATTT TTTAAAAGTA GACTTAGATA CAGCAGAACT TTTTTCAACT 
GCTAATATGG CGGAAAACAA CTACACTCAA AAGGACTATG AGGGTGTGTT GACTAAAGTT
CGAAAGGTTG CAGAAAATAC AGCAGTTTTA TTTGCTGATC GTGCATTCAT TGAATTACCG
TCACATTCTA CTTTTCATGA TAAATTACAA ATCATCAAAC ATCATATTAA TAACAAAGAC
ATCGTAGATG CATTTTTTGA GATTAAAGGG CATGGAAATA GCTCAGCTCA TAAACTAAAT
CCTAAAGATG CAACAAAAGA GAATGCATTA AAATCATTGA AGCAAGTTTA TATGATTTTA
GTTTGGTTTG TTACTGAGTA TGTTGATGAT CAAATTAAGG TCTCTTTGTA TGAGAATTTC
TTAGAACCTA AAGCTCAAGA GCGTTATACA ACTGCAGAAC GTAAGTTTAT TTATGTACAG
ACTGTGAATA ATGAAAGTGG GAAATTTTCT GCTTTTGAAG GGGCTCAAAA AATCGGAGAA
GGTACAGTAG CCTCAGACGA TATTGAAGCA GACTGGACAC CTAATAGTGA TTTTTTACGT
AGTGTTGCAC CTAAGCGTAT TAAACAATAT ATGACAACTT CTGGCCTTCC TTTTGAGCTT
GGATGGGTTG AACTAGCATA TAAAAAATCA ACAAAATCGT GGTTCCATGA CCATGAAGTT
CATGAAGTCT TGAGACGTTC AGGTATTAGT CATCCAAAGC ATTTAGAAGG AAATGAGTGG
TTTGAAACTG ATTTAGAGAC AGCTAAGGAA GCTATTAAAG CAGTCAAAGA TGGGCGATCA
TTTATCAGTG AAACTCAAGC TGCATACAAA GCCGAAAAAG TTAAAATTAC ACTACGTCCT
GAACAGGATG CTGCGGTTAA ACAGACACAA AAGACTTATA AGAAAAAAAA CCGTATGCTT
TGGAATGCCA AAATGCGTTT TGGTAAAACT TTAACCTCAT TGGAGCTTAT TAAACAAGAA
GGCTTTCAAC GTGTTTTAAT CATGACACAT AGACCAGTAG TCCGTGATTC ATGGTTTGAA
GACTACAAAA AAATGGAAAT GGCAGAAGCG GGGTATTTGT ATGGATCAGT TGATAAAGGA
GAGAAACTAA CTACCCTAAA ATCTGGTGAT AAACCATTTA TTTATTTCAC ATCTATTCAG
TATTTACGTT ATAATGGCGC TCAAGCCAAT CTCCCTTTGT TTTCGGATAT AGACTGGGAT
TTAATCATCA TCGATGAAGC ACATGAGGGA ACACAGACTG AACTTAGTGA TACTGTCATG
AAATCTTTGG TAAAAGACGG TCATACCAAG ATTCTAGAAT TGTCTGGTAC ACCATTTAAT
CTGCTTGATC AGTTCGAACC TGAACAAGTC TACACTTGGG ACTATGTGAT GGAGCAACAA
GCTAAACTGA AATGGGATTT GGAAAATCCT GAACAACCTA ACCCTTATGA GCAACTTCCA
GAGGTACTAA TGTATACCTT TGAGATGAAA CATAAGGAAA AATTTACCGA TGAAAATAAG
TCCTTCAATT TCCGCGAATT TTTCAGAGTA GATGATAAGG GTGAATTAGT TTATAAAGCA
GATGTCCGAC GTTTTTTGGA TAATATCACT AACCCTGATA GTGAAACTAA TTATCCATTT
TCAACAAGAG AATATCGTGA TGAACTCCGT CATACTCTTT GGCTCATGCC GGGAGTTAGA
GAAGCCAATG CTTTTGAAAA GCTATTAAAA GAACACCCAG TGTTTGGGAT GGACTATAAG
ATTGTTAATG TAGTACGAAA CGATAAGAGT GATAATATCT TAGATACTTC AGGAGATGAT
CTTTCAAAGG TACGTCAAGC GATTACGGAT GATCCTTCAC AAACAAAAAC AATCACTTTA
ACTGTCCGTA GGTTGACAAC AGGAGTCAAT GTTCCTGAAT GGACAGCGGT GATGTTCCTT
TCAAATACAA GTAGCTCAAC GAATTACTTG CAAGCTGCAT TTCGTGCTCA AACGCCGTTC
TCTCATGAAA AACTTGGGAT GAAGAAACGT TGTTATATTT TTGATTTTGC TCCAGATCGT
GCTTTAACAG TAATGGCTGA GACAGCCCAA ATAAACTCTG GTGTTGGAAA GAAAAATACC
CATCAGCAAA AACAGGCGAT GGCGAATTTG CTTAACTTTC TGCCTATCTT AGGTAAAAGT
GATAATGGCA TGGAACCATT TAATGTTGAC CGTATGTTGA CTCAAATCAA AAAAGTATAT
GCTGAAAAAG CAGTACGTTC AGGTTTTGAA GATGATAGTC TCTACAATGA TAATCTCTTA
ACACTAACTT CTGATGATGC AGAACTTTTC AATAAACTAA ATGCTATCGT TGGTAAGACG
CAAAAACAAA AAACGCCTAC CAAAGTGACA ATAAACGTTA GTGATTTGAC TGATGAAGAA
TATGACCAGG CAGAAAAAGC TAAGAAAAAG AAACCTCGTG AGCGTAGCCA AGAGGAAAAA
GAGGCAATGG AGAAACTCAA AGAGGCTCGC AAACAACAAA AAACGATGAT TTCTATCTTA
CGTGGAGTTT CTATCCGTAT TCCAATGATG ATCTACGGAA TGGATGTTGA CTTAAGTAAA
GATATCACTA TCGAAGACTT TATCAAGGAA GTCGATGATG AATCTTGGAA AGAATTTATG
CCTGCTGGAT TCACTAAAGG GATGTTCAAA GAAATTACCA AGTATTATGA TGCAGAGGTC
TTTATTGAAG CAGGTCGAAT CATTCGTCAA CGAGCTAAAT CTTTTGATAG TCTTGATTTT
ATTGAGCGTG CCGAAGAGAT CGCAACCTTA TTTGGTAGCT TCAAGAATCC TGATAAAGAA
ACTGTTTTGA CACCATGGCG CGTGGTCAAT ATGCAAATTG CAAAAGGTAT TGGTGGACTT
AATTTCTATG ACGATAACTT TGAGTCAATG ACTGATGGTG CTACACCAAA TCTCCATTGG
GTAGAAACAG ATGTTACTGA TAGTGTCTAT CATCCAGAAA CTAAGATTAT TGATATCAAT
GCTAAGACAG GGCTTTATCC TTTGCATGCT GCTATGAGTC TCTATTATCA ATATGTACAA
AATAATGATG ATAATCGATT TGATGCCGAA AGTGTCTATC GTGGGATCTT AGAAAATAAT
ATCTATGCCA TTGCAAAAAC ACCAATGGCT AAGACCATTA CAGAAAGAAC TTTAAAAGGC
TATAAGAAAT ATAAGACTAA TGTAGCCTAT ATCGAAAACT TCTCAGATAC ATTAAAATCA
AGTATAGAAG AAGGTAAAAA ACAAGTAGAG GAGGCTTTTG GAAAAGTGAA GTTTGATGTT
GTGATTGGGA ATCCACCGTA TCAGGAATCA GATAATAAAT CTGGTAATGG AAGCGCCACG
CCGTTGTACG ATAAATTTAT AGAACTTTCT ATTGGTATTA AACCTAAGTA TATTTCGTTA
ATTACGCCTA GTGTTTGGTT CTTGGGAGGG AAAGGTTTAG ATAATTTTAG AAGAAAAATG
CTGGAAGATA TTCATATCAA ATCTTTTCAT AATTATGTCA CACCAAATGA TGTTTTTCAA
AATGTAAGTT TAAGAGGAGG AGTTAATTTC TTTGTTTGGG ATGCTAATTT TAATAATACG
AAATGCTTCA TACATACGGA GACTATAAAA AACTCTAAGA TAGTAGATAG TTCGGATAGA
CCTTATCGCT TACTAGATTT AGATTTGTTT ATTTCTGATA GTAGAGCGTA TACACTTCTC
CAGAACATGT TGGAAAGAAA CTATATTAGT TTGGACTTTG AAGATAAGAA ATTAATGTTA
TATGGATTTG TTTCAGAGAG AAATCCTTTT GGTATTGCTA CAACGATGAA GGATTTTGGA
GAAGAAAATG ATGATAATGA TATAAAAATC TATGCAAGTA AAGGGCGTGT AGGATTTTTA
CCTAGGTCCA CAATTAAACG AAATCTGGAA TTAGTTGATT CTTATAAAGT TTTAACTGCA
TTTGCAAATA ATATTGGAAC AGATTTGCCA GACGATAATT TGAATACTAT CGTTTCGGAA
CCCAAAAGTG CTTGTACAGA AACATATCTG GTTATTGGTG GGAATCTTAA GTTGACCAGA
GATACTGCTA ATAATTTATC AAAATATCTA AAAACAAAAT TTGTTCGCAT GTTGATTATG
TTAGCAAAGG CAAATCAAAA TGGTACAAGA AAAACCTATA GATTTGTACC TCTTCAAAGT
TTTACAAGTG ACTCAGATAT TGATTGGTCA CAATCCATTG CAAAAATCAA TCAGCAATTG
TATCGAAAAT ATGAGCTAAG TGAAGAAGAA ATTATCTTCA TTGAAGAAAA TATAAAAGAA
ATGGAGTAA
 
Protein sequence
MASNFDFLKV DLDTAELFST ANMAENNYTQ KDYEGVLTKV RKVAENTAVL FADRAFIELP 
SHSTFHDKLQ IIKHHINNKD IVDAFFEIKG HGNSSAHKLN PKDATKENAL KSLKQVYMIL
VWFVTEYVDD QIKVSLYENF LEPKAQERYT TAERKFIYVQ TVNNESGKFS AFEGAQKIGE
GTVASDDIEA DWTPNSDFLR SVAPKRIKQY MTTSGLPFEL GWVELAYKKS TKSWFHDHEV
HEVLRRSGIS HPKHLEGNEW FETDLETAKE AIKAVKDGRS FISETQAAYK AEKVKITLRP
EQDAAVKQTQ KTYKKKNRML WNAKMRFGKT LTSLELIKQE GFQRVLIMTH RPVVRDSWFE
DYKKMEMAEA GYLYGSVDKG EKLTTLKSGD KPFIYFTSIQ YLRYNGAQAN LPLFSDIDWD
LIIIDEAHEG TQTELSDTVM KSLVKDGHTK ILELSGTPFN LLDQFEPEQV YTWDYVMEQQ
AKLKWDLENP EQPNPYEQLP EVLMYTFEMK HKEKFTDENK SFNFREFFRV DDKGELVYKA
DVRRFLDNIT NPDSETNYPF STREYRDELR HTLWLMPGVR EANAFEKLLK EHPVFGMDYK
IVNVVRNDKS DNILDTSGDD LSKVRQAITD DPSQTKTITL TVRRLTTGVN VPEWTAVMFL
SNTSSSTNYL QAAFRAQTPF SHEKLGMKKR CYIFDFAPDR ALTVMAETAQ INSGVGKKNT
HQQKQAMANL LNFLPILGKS DNGMEPFNVD RMLTQIKKVY AEKAVRSGFE DDSLYNDNLL
TLTSDDAELF NKLNAIVGKT QKQKTPTKVT INVSDLTDEE YDQAEKAKKK KPRERSQEEK
EAMEKLKEAR KQQKTMISIL RGVSIRIPMM IYGMDVDLSK DITIEDFIKE VDDESWKEFM
PAGFTKGMFK EITKYYDAEV FIEAGRIIRQ RAKSFDSLDF IERAEEIATL FGSFKNPDKE
TVLTPWRVVN MQIAKGIGGL NFYDDNFESM TDGATPNLHW VETDVTDSVY HPETKIIDIN
AKTGLYPLHA AMSLYYQYVQ NNDDNRFDAE SVYRGILENN IYAIAKTPMA KTITERTLKG
YKKYKTNVAY IENFSDTLKS SIEEGKKQVE EAFGKVKFDV VIGNPPYQES DNKSGNGSAT
PLYDKFIELS IGIKPKYISL ITPSVWFLGG KGLDNFRRKM LEDIHIKSFH NYVTPNDVFQ
NVSLRGGVNF FVWDANFNNT KCFIHTETIK NSKIVDSSDR PYRLLDLDLF ISDSRAYTLL
QNMLERNYIS LDFEDKKLML YGFVSERNPF GIATTMKDFG EENDDNDIKI YASKGRVGFL
PRSTIKRNLE LVDSYKVLTA FANNIGTDLP DDNLNTIVSE PKSACTETYL VIGGNLKLTR
DTANNLSKYL KTKFVRMLIM LAKANQNGTR KTYRFVPLQS FTSDSDIDWS QSIAKINQQL
YRKYELSEEE IIFIEENIKE ME