Gene STER_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1236 
Symbol 
ID4436952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1139614 
End bp1140333 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content40% 
IMG OID639676867 
Productalpha/beta fold family hydrolase 
Protein accessionYP_820620 
Protein GI116628001 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000165889 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTA AAGTGAAAGA TGGTCAAATC ATCTATTATC GTGACCTCGG TAAAGGATTT 
CCAATTGTCT TCTTGCATGG CAATAATTCA TCAGGAAACT ACTTTGGTAA GCAAGGAATT
CTATATCGAG ACTATCGTTT AATTTTCATT GATAGTCGTA ATCAGGGCAG ATCTAGTCGT
CAGAGTGCTA AGATGACCTT TGAACAGATG GCTGCCGATT TGGAGGAGAT TTTGCAATTT
TTAAATATCA AAAAGGCTCT GTTTGTTGGT CACAGTGATG GGGCTAATCT AGCTATGGTT
TATGCCAGTC GCTTTCCTGA CCGGATTGCA GGGCTCTTGC TTAATGCGGG GAATATGACT
TTTAAAGGAT TGACCAGACG TTCAAGATGT CTGGTTTATA TAAAGTATTA TTGCCTAAAA
GCCTTATCAC TATTTTCATC TAAAATGGAC ATCTTGGCTC AGGTAACGGA GCTCATGCTA
CATGATTTAC CGCTGGATAG GGAACGACTA CATCAGGCAT CCTATCCTGT TTGGGTAGTT
ATGGGACAAA GAGATGTCAT TAGTATTAGT CATTCAAGGG AGATTTCGGA CCTCTTTCCA
ATTCATAAGC TCTATGTCGA GCGTCGACAA GGACACCGTT TAGCCCAACA AAAATACAAG
GTTTTTAATC AAATGATCCG TGAGTTAGTT AGAATTAGTC AAAAAGAGGT GGTGGCATGA
 
Protein sequence
MEFKVKDGQI IYYRDLGKGF PIVFLHGNNS SGNYFGKQGI LYRDYRLIFI DSRNQGRSSR 
QSAKMTFEQM AADLEEILQF LNIKKALFVG HSDGANLAMV YASRFPDRIA GLLLNAGNMT
FKGLTRRSRC LVYIKYYCLK ALSLFSSKMD ILAQVTELML HDLPLDRERL HQASYPVWVV
MGQRDVISIS HSREISDLFP IHKLYVERRQ GHRLAQQKYK VFNQMIRELV RISQKEVVA