Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1236 |
Symbol | |
ID | 4436952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1139614 |
End bp | 1140333 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639676867 |
Product | alpha/beta fold family hydrolase |
Protein accession | YP_820620 |
Protein GI | 116628001 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000165889 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTA AAGTGAAAGA TGGTCAAATC ATCTATTATC GTGACCTCGG TAAAGGATTT CCAATTGTCT TCTTGCATGG CAATAATTCA TCAGGAAACT ACTTTGGTAA GCAAGGAATT CTATATCGAG ACTATCGTTT AATTTTCATT GATAGTCGTA ATCAGGGCAG ATCTAGTCGT CAGAGTGCTA AGATGACCTT TGAACAGATG GCTGCCGATT TGGAGGAGAT TTTGCAATTT TTAAATATCA AAAAGGCTCT GTTTGTTGGT CACAGTGATG GGGCTAATCT AGCTATGGTT TATGCCAGTC GCTTTCCTGA CCGGATTGCA GGGCTCTTGC TTAATGCGGG GAATATGACT TTTAAAGGAT TGACCAGACG TTCAAGATGT CTGGTTTATA TAAAGTATTA TTGCCTAAAA GCCTTATCAC TATTTTCATC TAAAATGGAC ATCTTGGCTC AGGTAACGGA GCTCATGCTA CATGATTTAC CGCTGGATAG GGAACGACTA CATCAGGCAT CCTATCCTGT TTGGGTAGTT ATGGGACAAA GAGATGTCAT TAGTATTAGT CATTCAAGGG AGATTTCGGA CCTCTTTCCA ATTCATAAGC TCTATGTCGA GCGTCGACAA GGACACCGTT TAGCCCAACA AAAATACAAG GTTTTTAATC AAATGATCCG TGAGTTAGTT AGAATTAGTC AAAAAGAGGT GGTGGCATGA
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Protein sequence | MEFKVKDGQI IYYRDLGKGF PIVFLHGNNS SGNYFGKQGI LYRDYRLIFI DSRNQGRSSR QSAKMTFEQM AADLEEILQF LNIKKALFVG HSDGANLAMV YASRFPDRIA GLLLNAGNMT FKGLTRRSRC LVYIKYYCLK ALSLFSSKMD ILAQVTELML HDLPLDRERL HQASYPVWVV MGQRDVISIS HSREISDLFP IHKLYVERRQ GHRLAQQKYK VFNQMIRELV RISQKEVVA
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