Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1187 |
Symbol | |
ID | 4438283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1095120 |
End bp | 1095764 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639676820 |
Product | endonuclease III, DNA repair |
Protein accession | YP_820573 |
Protein GI | 116627954 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00300969 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGGTA GAAAACGTGT TAATGAAGCT CTGGCCTTAA TGGGAAAGAT GTTTCCAGAT GCACATGGTG AGCTGGAGTG GGAGACTCCC TTTCAACTAC TAGTTGCTGT TATTTTATCT GCTCAAACAA CTGACAAAGC TGTTAATAAG GTAACACCGG GTTTGTGGGC CCGTTATCCA GAAATTGAAG ATTTAGCATC TGCTAATCTT GATGATGTTG AAATGTGCTT AAGAACCATT GGGCTATATA AGAATAAGGC AAAGAATATC ATCAAAACTG CTAGAGCTAT TTTAATGAAT TTCGACGGAC AAGTTCCCAA AACTCACAAG GAATTAGAGA GTCTACCTGG TGTTGGACGA AAAACAGCTA ACGTCGTATT GGCTGAAGTC TATGGTATTC CGTCTATTGC TGTAGATACA CATGTCTCTC GCGTTTCTAA ACGGCTGAAT ATAGCTCCAG AAAATGCTAG TGTAGAGGAA ATCGAAGCAG AATTGATGAA GAAAATACCA AAGAAAGATT GGATTATCAG TCATCACCGC ATGATTTTCT TTGGACGCTA TCATTGTTTA GCAAAGAATC CTAAATGCCA GACTTGTCCT CTTCAAAGTT ACTGTAAGTA TTATCGAGAA ACAACTAAGA AATAA
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Protein sequence | MLGRKRVNEA LALMGKMFPD AHGELEWETP FQLLVAVILS AQTTDKAVNK VTPGLWARYP EIEDLASANL DDVEMCLRTI GLYKNKAKNI IKTARAILMN FDGQVPKTHK ELESLPGVGR KTANVVLAEV YGIPSIAVDT HVSRVSKRLN IAPENASVEE IEAELMKKIP KKDWIISHHR MIFFGRYHCL AKNPKCQTCP LQSYCKYYRE TTKK
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