| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0992 |
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| Symbol | trmE |
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| ID | 4438449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 911953 |
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| End bp | 913323 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639676646 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_820400 |
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| Protein GI | 116627781 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00719085 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAATTA CCAAAGAATT CGATACTATC ACTGCTATCT CAACTCCCTT AGGTGAAGGT
GCTATTGGTA TCGTCCGCTT GTCTGGGACC GATGCTATTG CTATTGCTAA TAAGGTTTTC
AAAGGTAAAA ATCTTGAAAC CGTTGATTCT CATACTATCA ACTACGGCCA TATTGTCGAA
AATAATGAAA TTATTGATGA AGTCATGGTC AGTGTTATGC GTGCACCAAA AACCTTTACA
CGTGAGGATG TCGTAGAAAT CAATACACAT GGTGGTGTCG CAGTTACCAA TGAAATCCTT
CAACTCCTGA TTCGTTCTGG TGCTCGTATG GCCGAACCAG GGGAATTTAC CAAACGTGCC
TTCTTAAATG GACGGATAGA TTTGACCCAG GCTGAAGCTG TCATGGATTT GATTCGTGCC
AAAACTGATA AGGCTATGAC TGTTGCTGTC TCTCAGTTAG ATGGTTCGCT TAAAAATCTC
ATTAACAACA CACGCCAAGA AATCCTTAAT ACTTTGGCAC AAGTCGAAGT CAATATTGAT
TACCCAGAGT ATGATGATGT TGAAGAAGTT ACCACAAATC TAGTCCGTGA GAAAACTCAA
GAGTTCCAGG CTCTCTTGGA AAATCTTCTT GCAACTGCCA AACGAGGAAA AATCCTACGA
GAAGGTCTTT CGACGGCAAT CATAGGCCGT CCTAATGTCG GAAAGTCTAG CCTTCTCAAC
AATCTCCTAC GTGAGGAGAA AGCCATCGTC ACTGATATTG AAGGGACTAC CCGTGATGTT
ATTGAAGAAT ACGTTAATAT CAAGGGTGTT CCTCTTAAGT TAATCGATAC CGCTGGTATT
CGTGACACAG ATGATGTGGT CGAAAAAATT GGTGTTGAGC GTTCTAAAAA AGCTCTTGAA
GAGGCTGATT TGGTCCTTCT TGTGCTTAAT AGCTCTGAAC CACTTACCGA CCAAGACCGT
ACACTGCTTG ACATCAGCCA AAATAGCAAC CGAATCATTC TCTTAAATAA GACGGACCTT
CCACAAGCTA TCCAGACTGA AGAGCTTCCT GAGGACCTTA TCCCAATTTC AGTCCTCAAA
AATGAAAACA TTGACAAAAT CGAAGATCGT ATCAACCAAC TCTTCTTTGA TAATGCTGGC
TTAGTAGAAA AAGATGCTAC TTATCTTTCA AATGCACGCC ATATCTCACT CATTGAAAAG
GCGCTTGAAA GTCTCGAAGC CGTTAATCAA GGTCTTGAAT TAGGTATGCC TGTTGACCTA
TTACAAGTTG ATATGACTCG CACATGGGAA ATTCTTGGCG AAATTACTGG TGACGCCGCA
CCGGATGAGC TTATTACTCA ACTCTTTAGT CAGTTCTGTC TCGGTAAATA G
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| Protein sequence | MSITKEFDTI TAISTPLGEG AIGIVRLSGT DAIAIANKVF KGKNLETVDS HTINYGHIVE
NNEIIDEVMV SVMRAPKTFT REDVVEINTH GGVAVTNEIL QLLIRSGARM AEPGEFTKRA
FLNGRIDLTQ AEAVMDLIRA KTDKAMTVAV SQLDGSLKNL INNTRQEILN TLAQVEVNID
YPEYDDVEEV TTNLVREKTQ EFQALLENLL ATAKRGKILR EGLSTAIIGR PNVGKSSLLN
NLLREEKAIV TDIEGTTRDV IEEYVNIKGV PLKLIDTAGI RDTDDVVEKI GVERSKKALE
EADLVLLVLN SSEPLTDQDR TLLDISQNSN RIILLNKTDL PQAIQTEELP EDLIPISVLK
NENIDKIEDR INQLFFDNAG LVEKDATYLS NARHISLIEK ALESLEAVNQ GLELGMPVDL
LQVDMTRTWE ILGEITGDAA PDELITQLFS QFCLGK
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