Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0922 |
Symbol | |
ID | 4437214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 851598 |
End bp | 852437 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639676589 |
Product | DNA processing protein, Smf family |
Protein accession | YP_820343 |
Protein GI | 116627724 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACT TTGAACTTTT TAAACTAAAA GCTGCTGGAT TGACGAATTT AAACATCCTT AACATTTTAG ACTATCAAAA AAATCAAGAT AAAAAATTGA GCTTACGTGA TATGGCAGTG GTATCTAAGT CTAAAAATGC CGTTCTCTTT ATGGAAAAAT ACAAGAATTT GGATGTTAAG CAGCTTAAGG AAGATTTTCA ACGTTTTCCG ACCTTATCAA TTTTTGATAA GGAGTATCCC ATTGAGCTGA AACATTCCTA TAATCCTCCT GTTCTCCTCT TTTATCAAGG GAATATTGAT TTGCTAAGTA AACCCAAGTT AGCAGTAGTT GGTGCCAGAA AGTGTTCTGA AACAGGCAAA CAGTCTGTTC GAAAAATTGT TCATGAACTT GGGAATGCCT TTACTATTGT AAGTGGCTTG GCGCGTGGAA TTGATACTTG CGCTCATATG GAGGCCTTAA AAAATAAAGG TAACACCATT GCAGTTATCG GGACTGGGCT AGACGTATAT TATCCTAAAG AAAACAAAGC TTTACAGGAC TATATGGCTA AAAATCATTT AGTTCTTACA GAATACGGAC CGGGTGAACA GCCACTTAAA TACCATTATC CTGAACGAAA TCGGATAATT TCTGGATTGT GTCAAGGGGT TATGGTGGTT GAAGCCAAGC TTCGCTCGGG AAGTCTTATT ACTTGTGAGC GTGCAATGGA AGAAGGAAGA GATGTTTTCG CCATACCAGG AAATATTTTA GATGGAAAAT CGGATGGATG CCATCACCTC ATTCAAGAGG GCGCAAAGTG CATTACTACA GGATTTGACA TCATTTCAGA ATTTTCATAA
|
Protein sequence | MNNFELFKLK AAGLTNLNIL NILDYQKNQD KKLSLRDMAV VSKSKNAVLF MEKYKNLDVK QLKEDFQRFP TLSIFDKEYP IELKHSYNPP VLLFYQGNID LLSKPKLAVV GARKCSETGK QSVRKIVHEL GNAFTIVSGL ARGIDTCAHM EALKNKGNTI AVIGTGLDVY YPKENKALQD YMAKNHLVLT EYGPGEQPLK YHYPERNRII SGLCQGVMVV EAKLRSGSLI TCERAMEEGR DVFAIPGNIL DGKSDGCHHL IQEGAKCITT GFDIISEFS
|
| |