Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0733 |
Symbol | lysS |
ID | 4438179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 666939 |
End bp | 668429 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639676431 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_820185 |
Protein GI | 116627566 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.874449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAATC AACACATGGA AGAATTAAAC GATCAACAGA TTGTCCGTCG TGAAAAAATG GCGGCCTTGG CTGAACAAGG AATCGATCCT TTTGGTAAGC GATTCGAACG CACAGCTACA TCTGGTCAAT TAAAAGAAAA ATACGCCGAT AAAACAAAAG AAGAATTGCA CGAAATCAAT GAAACTGCTA CTATCGCAGG CCGTTTGATG ACTAAGCGTG GTAAAGGTAA AGTTGGCTTT GCTCACATCC AAGATCGCGA TGGTCAAATC CAAATCTATG TGCGTAAAGA TGCTGTCGGT GAAGAAAACT ACGAAATCTT CAAGAAAGCT GACCTTGGTG ACTTCCTCGG TGTCGAAGGT GAAGTTATGC GTACAGATAT GGGAGAACTT TCTATCAAGG CTACTCATAT CACGCACTTG TCTAAAGCCC TTCGTCCATT GCCTGAGAAA TTCCACGGAC TTTCAGACAT TGAAACGATT TACCGTAAAC GTTACCTCGA TTTGATTTCT AACCGTGAAA GCTTTGACCG CTTTGTCACA CGTTCAAAAA TCATTTCTGA AATCCGTCGC TACCTCGATG CTCAAGGTTT CCTTGAAGTC GAAACACCAG TGCTTCACAA TGAAGCTGGG GGTGCGGCTG CCAAACCATT TATTACACAC CACAATGCTC AAAATATTGA TATGGTGCTT CGTATAGCTC TAGAACTTCA TCTCAAACGT CTCATTGTTG GTGGTATGGA ACGCGTCTAT GAGATTGGCC GTATCTTCCG TAACGAAGGA ATGGATGCAA CTCATAATCC TGAATTTACT ATGATTGAGG TTTACCAAGC CTATGCTGAT TTCCATGATA TTATGGATTT AACAGAAGGT ATTATCCAGC ATGCTGCAAA AGCTGTCAAA GGAGATGGGC CTGTCAACTA CCAAGGAACA GAAATCAAAA TCAACGAACC ATTCAAACGC ATCCATATGG TTGATGCCAT CAAGGAAATC ACTGGCGTTG ACTTCTGGCA AGACATGACC TTTGAAGAAG CTGTAGCACT TGCAAACGAA AAACATGTAC CAGTTGAAAA ACACTACACA GAAGTGGGAC AAATTATCAA TGCCTTCTTC GAAGAATTTG TTGAAGAAAC CTTGACGCAA CCAACTTTTG TTTATGGTCA CCCAGTAGCA GTGTCACCTT TGGCTAAGAA AAATCCAGAA GACCCACGCT TCACGGATCG TTTTGAGCTC TTCATTATGA CCAAAGAATA CGGAAATGCC TATTCTGAGT TGAATGATCC AATCGATCAA TTGTCACGTT TCGAAGCACA AGCTGCTGCT AAAGAACTCG GTGACGACGA AGCAACAGGC ATCGACTACG ACTACGTTGA AGCTCTCGAA TACGGTATGC CACCAACAGG TGGACTCGGA ATCGGTATCG ACCGTCTCTG CATGCTTCTT ACTGACACAA CAACCATCCG TGATGTCTTG TTGTTCCCAA CGATGAAATA A
|
Protein sequence | MPNQHMEELN DQQIVRREKM AALAEQGIDP FGKRFERTAT SGQLKEKYAD KTKEELHEIN ETATIAGRLM TKRGKGKVGF AHIQDRDGQI QIYVRKDAVG EENYEIFKKA DLGDFLGVEG EVMRTDMGEL SIKATHITHL SKALRPLPEK FHGLSDIETI YRKRYLDLIS NRESFDRFVT RSKIISEIRR YLDAQGFLEV ETPVLHNEAG GAAAKPFITH HNAQNIDMVL RIALELHLKR LIVGGMERVY EIGRIFRNEG MDATHNPEFT MIEVYQAYAD FHDIMDLTEG IIQHAAKAVK GDGPVNYQGT EIKINEPFKR IHMVDAIKEI TGVDFWQDMT FEEAVALANE KHVPVEKHYT EVGQIINAFF EEFVEETLTQ PTFVYGHPVA VSPLAKKNPE DPRFTDRFEL FIMTKEYGNA YSELNDPIDQ LSRFEAQAAA KELGDDEATG IDYDYVEALE YGMPPTGGLG IGIDRLCMLL TDTTTIRDVL LFPTMK
|
| |