| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0489 |
|---|
| Symbol | |
|---|
| ID | 4436807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 435992 |
|---|
| End bp | 437797 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639676209 |
|---|
| Product | oligopeptidase |
|---|
| Protein accession | YP_819966 |
|---|
| Protein GI | 116627347 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA ATCGTTGTCA TTTAGAAGAA AAATATACAT GGGATTTGAC TACCATTTTT
GCGACAGACG CTGATTGGGA GACTGAATAT GAAAGCATTG TTCAGGATTT GAAGAAGGCT
AGTTCCTTTG CTGGTCACCT CTTGGACTCA GCCAAGAATT TGCTTGAGGC AACAGAACTT
TATATGAGTT TGATGCGTCG TTTGGAAAAA ATCTACGTTT ATGCGTCAAT GAAAAATGAC
CAAGATACAA CGGTAGGTCT TTACCAAGAG TACAATGCCA AAGCCTCAAA CCTATACTCA
CAGTTGAGTG AAGCCTTTGC CTACTTTGAG CCTGAATTTA TGGCTTTGGA ATCTGAAAAA
TTAGTATCCT TCAAAGAACA AGAGCCAGGT CTTGGACTTT ATGACCACTA TTTCGAACGT
CTTTTGGCAA ACAAAGACCA CGTTCTTTCT CAAGAAGCAG AAGAACTCTT GGCAGCAGCT
GGTGATATTT TTAACGGTCC AACGGATACC TTCAACGTCT TGGATAATGC TGATATCCTC
TTTCCATGGG TATCGGATGG TCAAGGGGAT GTGATTGAGT TGACACATGG TAACTTTATC
ACCCTCATGG AATCTAAGAA TCGTGAAGTC CGTAAGGGAG CCTATGAAGC TATGTATAGA
ACTTATGAGC AGTTCCAACA TACCTATGCA CAAACACTTC AAGGCGTTGT CAAGGTTCAC
AATTATATGG CTAAAGTTCG TCACTATAAT TCGGCACGTC ATGCAGCACT TGCAGCTAAC
TTTATTCCAG AAAGTGTTTA CGACTCACTC TTAGAATCAG TGAATAAGCA TTTGCCACTT
TTGCACCGTT ACCTTGATTT GCGTAAGAAG GTGTTGGAAC TTGATGAGCT TAAGATGTAT
GATGTTTATG CACCACTTTC TGAGACAGAG ACTGCTCTTA CTTATGAAGA AGCCCTCAAG
AAAGCAGAGG AAGTCTTGGC TATCTTTGGT GAGGAGTATA GTAAAGGGGT TCATGCAGCC
TTTACGGAAC GTTGGATTGA TGTCCACCCT AACAAAGGGA AACGTTCAGG TGCCTACTCA
GGTGGTGCCT ATGATACCAA TGCTTTCATG CTTTTGAACT GGCAAGACAC TTTGGACAAT
CTCTTTACCT TGGTTCACGA GACTGGCCAC AGTTTGCATT CAACTTTCAC ACGTCAGACA
CAACCATATG TTTACGGAGA TTACCCAATC TTCTTGGCTG AAATTGCGTC TACAACTAAT
GAAAATATCT TGACAGAAAC ACTTCTTAAA GAAGTTAACG ATGATAAGAC ACGTTTTGCT
ATCCTTAACC ACTATTTAGA TGGATTTAAG GGAACCGTCT TCCGTCAAAC GCAATTTGCC
GAGTTTGAGC ATGCTATCCA TGAAGCGGAT GCATCGGGTC AAATCTTGAC AGCAGACTTC
ATGAATAAGC TTTATGCAGA CCTCAATGAG AAATACTATA ACCTTAAAGC TGAAGATAAC
TATGAAATTC AGTTTGAGTG GGAACGTATT CCGCATTTCT ACATGAATTA CTATGTTTAT
CAATATGCTA CAGGATTTGC AGCAGCAAGC TACTTGGCAG AAAAAATTGT TCACGGTAAT
GAAGAAGATA AAGAAGCTTA CCTTACGTAC CTTAAGTCAG GTAGCTCAGA CTATCCTTTG
GAAGTCATCA AGAAAGCTGG TGTTGACATG ACCAACACTG ACTACTTGGA TGCAGCTTTC
AAGGTTTTCG AAGACCGCTT AGTTGAATTG GAAGCCTTGG TTGAAAAAGG TGTTCATCTT
TCTTAA
|
|---|
| Protein sequence | MSDNRCHLEE KYTWDLTTIF ATDADWETEY ESIVQDLKKA SSFAGHLLDS AKNLLEATEL
YMSLMRRLEK IYVYASMKND QDTTVGLYQE YNAKASNLYS QLSEAFAYFE PEFMALESEK
LVSFKEQEPG LGLYDHYFER LLANKDHVLS QEAEELLAAA GDIFNGPTDT FNVLDNADIL
FPWVSDGQGD VIELTHGNFI TLMESKNREV RKGAYEAMYR TYEQFQHTYA QTLQGVVKVH
NYMAKVRHYN SARHAALAAN FIPESVYDSL LESVNKHLPL LHRYLDLRKK VLELDELKMY
DVYAPLSETE TALTYEEALK KAEEVLAIFG EEYSKGVHAA FTERWIDVHP NKGKRSGAYS
GGAYDTNAFM LLNWQDTLDN LFTLVHETGH SLHSTFTRQT QPYVYGDYPI FLAEIASTTN
ENILTETLLK EVNDDKTRFA ILNHYLDGFK GTVFRQTQFA EFEHAIHEAD ASGQILTADF
MNKLYADLNE KYYNLKAEDN YEIQFEWERI PHFYMNYYVY QYATGFAAAS YLAEKIVHGN
EEDKEAYLTY LKSGSSDYPL EVIKKAGVDM TNTDYLDAAF KVFEDRLVEL EALVEKGVHL
S
|
|---|
| |