Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0407 |
Symbol | |
ID | 4436727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 357761 |
End bp | 358423 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639676134 |
Product | late competence protein |
Protein accession | YP_819901 |
Protein GI | 116627282 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00143489 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGTC TACTATGTAA TGAATGGATT GAACCAGTAG CTCAATTAAG TGATTTAATT ATGTTTAAAC AAAGAAGAGA GTATTCTTGT GAAGATTGTA AAGCTCAATT TAAAAAGCTT GGGAAGGCGA GATGTTCAAA TTGTTATAAA ATAATAGATG GAAATAGTTG CTTTGATTGC AAAATTTGGG CGAAAAAAGG CTATATTCCA AAACATTTTG CCATTTATCG TTATGAAGAA AACATGAAAG AGTATTTTAG TCGCTATAAA TTTATGGGAG ATTATTGTCT TAGAAAAATA TTTCAACAAG AAATTAAAGC CAATTTAAAG TCTTTTTTAA AGAAAGGTTA TATCTTAGTA CCTGTCCCCT TGTCGGAAGA ACGCCTGGAA GAGAGAGGAT TCAATCAAGT TAAAGGATTA CTAGAGGGAA TCCCCTATAA AAACATTTTT GAAAAAAGAG AGATCGAGAA GCAATCCTCG AGAACACGCG AAGAGCGGTT AAGTCAAGAT AATTCTTTCA GTTTGAAGAA AGGTATTGAG CTACCAAGTA AGATCATCAT AATCGATGAT ATTTACACAA CAGGATCTAC CCTGTATCAA ATGGTCAAAC TATTAGAGGA TTTAGATGTC AAAGAAGTTT TGACATTTTC CTTAGCTAGA TAA
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Protein sequence | MKCLLCNEWI EPVAQLSDLI MFKQRREYSC EDCKAQFKKL GKARCSNCYK IIDGNSCFDC KIWAKKGYIP KHFAIYRYEE NMKEYFSRYK FMGDYCLRKI FQQEIKANLK SFLKKGYILV PVPLSEERLE ERGFNQVKGL LEGIPYKNIF EKREIEKQSS RTREERLSQD NSFSLKKGIE LPSKIIIIDD IYTTGSTLYQ MVKLLEDLDV KEVLTFSLAR
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