| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0401 |
|---|
| Symbol | |
|---|
| ID | 4436721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 352315 |
|---|
| End bp | 353079 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639676129 |
|---|
| Product | ABC-type branched-chain amino acid transport system, ATPase component |
|---|
| Protein accession | YP_819896 |
|---|
| Protein GI | 116627277 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTC TTGAAGTTAA AAATTTAACT AAAAACTTTG GTGGTTTGAC TGCTGTTGGT
GATGTTTCAA TGGAACTCAA TGAAGGTGAG TTGGTTGGGC TAATAGGGCC AAACGGTGCT
GGTAAAACAA CCTTGTTCAA CCTTTTGACT GGTGTCTATG AGCCAAGTGA AGGGACTGTA
ACGCTTGATG GTATAGTTCT CAACGGTAAA GCACCTTACA AGATTGCGTC ACTCGGTTTG
TCACGTACTT TCCAAAATAT CCGCCTTTTC AAAGACATGA CTGTACTTGA AAATGTTCTT
GTTGGTTTAT CAAATAAGCA ACCTTCAAAT TTCTTTGCAT CTCTTTTGCG CTTGCCTAAG
TACTATTCAA GTGAGGAAGA GTTGAAAGAC AAAGCTATGA AGCTCTTGGC TATCTTTAAC
TTGGATGGTG AGGCAGATAC GCTTGCGAAA AACTTGGCTT ATGGACAACA ACGTCACTTG
GAGATTGTTC GTGCGCTTGC AACGGAACCT AAAATTCTTT TCCTTGATGA ACCAGCTGCT
GGTATGAACC CACAAGAAAC AGCTGAGTTG ACTGCTCATA TTCGTCAAAT TCAAAAAGAT
TTCGGTATTA CAATTATCTT GATTGAGCAC GATATGAGTT TGGTCATGGA TGTCACTGAG
CGTATCTATG TTTTAGAATA TGGACGCTTG ATTGCAGAAG GAACCCCTGA TGAAATTAAG
AATAACAAGC GTGTTATCGA AGCTTACTTG GGAGGTGAAG CATAA
|
|---|
| Protein sequence | MALLEVKNLT KNFGGLTAVG DVSMELNEGE LVGLIGPNGA GKTTLFNLLT GVYEPSEGTV
TLDGIVLNGK APYKIASLGL SRTFQNIRLF KDMTVLENVL VGLSNKQPSN FFASLLRLPK
YYSSEEELKD KAMKLLAIFN LDGEADTLAK NLAYGQQRHL EIVRALATEP KILFLDEPAA
GMNPQETAEL TAHIRQIQKD FGITIILIEH DMSLVMDVTE RIYVLEYGRL IAEGTPDEIK
NNKRVIEAYL GGEA
|
|---|
| |